Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5426g00005 ATGTCTACTTCCAAAATCTACGCACTTACTTCTTCCCTCTTCGTCTTCCTAACAATCTTCACAAGCGAAGCTTCTTTTAATTACACTGCTCATCACTGCTCAAACGCCACCATCCGCAACGCCACATTCCGACGAAACCTCAACGTCCTCCTCTACTCCCTCACCTCCAACGCCTCCCAGTTCGGCGGCTACTACATGACCATCATGGGCTTTGGAACCATCGACGCCGTCAACGGCCTCTTTCTCTGCCGTGGCGACATCGTCTCCCACACAATCTGCCAAGAGTGCGTCACCGCCGCTGCCAATGACATAACTTCCCGTTGCCCTAATCGAACCGAGGCCATAATCTGGTATGACCAGTGCATGCTGCGTTACACCGACAAGTTTTTCTGGTTCAACAGTGCCGTTCCTAGGGTAACCCTCGATGACGGTAAGATCTTCTCCGGCAGGGACCTGGAACAGTTCAACTTCTCTTTATTCAGCTTACTCAATGACTTGAGTACGAAGGCTGCGAAATCACCGACGGTGAAGAAGTTTGCTGTGGGCGAAGCGATATTATCGAGCTCGCCGTTGACGACGCTGTATGCTTTAGAACAGTGCACGCATGATTTAACCAGTGATCAGTGTGAGACATGTTTGCGAAAGGCCATCGAAACTTTTGTTGGTAATTGTTGTGTGGGAAAACAAGGGGCGAGGGTTCTTCTTGCTTCGTGCAACATCAGATATGAACTGTACCCCTTTTACAATGTAACGGCTGTATCACCTGGACCTGTTGTAAGATTTCCTCCTCCGTCAGGAAAGGAGATAAATGAAACACGAAGAATTGTTCTAGTTGTTGTCCCAGTTTCAGTTGTTGTTATGATCTTCTGTCTCGGAGGGTTTTTCCTGCTGAAAATACGGAAGAGGCATAAGACTGCAATTGCTGAAATTCAACTTGGTATACGATTATATATATGTATAATAGATGGAGAAGAACTTACTCCTCTAGAGTCGTTGCAATTCTCTTTTGCCACAATTGAAGCTGCGACAAACAATTTTTCACAGCTTAACAAAATAGGCAAAGGTGGATTTGGGGAAGTCTACAAGGGTGTGCTTCCAGATAAACGCGAAATAGCAGTTAAGAAACTTTCAAGTAAATCTAAGCAGGGTGTGGTGGAATTTAAGAATGAGATTTCACTTATTGCCAATCTTCAACATAGAAATCTGGTTGCCTTGATTGGGTTTTGCTTGGAAGAAGATGAGAAAATGCTTATCTATGAATATGTGCCTAACAAGAGTCTTGATTACTTTTTATTTGATACTAATCCAAAGCGAAGGATATTAAATTGGTCAGAACGTTATAAGATCATAAGAGATATTGCAAGAGGAGTTCTATATCTACATGAGTATTCACGGCTCAAAGTTATACATCGTGATCTCAAGCCCAGCAATGTGTTGTTAGATGATAACATGAATTCAAAAATATCTGACTTTGGCTTAGCAAGAATAGTTGCTACAAATCAAAATCAGGAAATTACTAATAGAATAGTTGGAACACATGGTTATATGTCTCCTGAATATGCAATGTATGGGCGGTTTTCAGAAAAATTAGATATATATAGTTTTGGAGTTATAATCCTGCAAATAATTAGTGCAAAAAGAATTGCTCGATCCCCGATTTCAAAGATTTTTGAAGATCTTTTAAGCCAGGCATGGAGACAGTGGAGGAATCATACCCCACTGGAAATTATGGAGTCAACCCTAAAAGAAACATACTCTCGCACTGAAGTCATAAAGTGCATTCAAATTGGGTTATTGTGTGTACAAGAAGACCCAGATGATAGACCCACAATGGCCACAGTTATTTCATACCTCAATACCCAATTGATTGATTTGCCATTTCCAAGAGAACCTGCACTCTTCAGGTACAGTGCTGGGAAATCAACCAACATGGAAGATGGAGATTGCAGCTCAGGACAACCGTCCATTGATTGCAGCTCAGGACTTTCTTCCATCAATGACATGTCCAAGAGCACTTTTTTCCCTCGATAG 2031 0.4225 MSTSKIYALTSSLFVFLTIFTSEASFNYTAHHCSNATIRNATFRRNLNVLLYSLTSNASQFGGYYMTIMGFGTIDAVNGLFLCRGDIVSHTICQECVTAAANDITSRCPNRTEAIIWYDQCMLRYTDKFFWFNSAVPRVTLDDGKIFSGRDLEQFNFSLFSLLNDLSTKAAKSPTVKKFAVGEAILSSSPLTTLYALEQCTHDLTSDQCETCLRKAIETFVGNCCVGKQGARVLLASCNIRYELYPFYNVTAVSPGPVVRFPPPSGKEINETRRIVLVVVPVSVVVMIFCLGGFFLLKIRKRHKTAIAEIQLGIRLYICIIDGEELTPLESLQFSFATIEAATNNFSQLNKIGKGGFGEVYKGVLPDKREIAVKKLSSKSKQGVVEFKNEISLIANLQHRNLVALIGFCLEEDEKMLIYEYVPNKSLDYFLFDTNPKRRILNWSERYKIIRDIARGVLYLHEYSRLKVIHRDLKPSNVLLDDNMNSKISDFGLARIVATNQNQEITNRIVGTHGYMSPEYAMYGRFSEKLDIYSFGVIILQIISAKRIARSPISKIFEDLLSQAWRQWRNHTPLEIMESTLKETYSRTEVIKCIQIGLLCVQEDPDDRPTMATVISYLNTQLIDLPFPREPALFRYSAGKSTNMEDGDCSSGQPSIDCSSGLSSINDMSKSTFFPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5426g00005 676 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 660 - -
Pral5426g00005 676 Gene3D Phosphorylase Kinase; domain 1 321 421 - -
Pral5426g00005 676 FunFam cysteine-rich receptor-like protein kinase 10 422 625 - -
Pral5426g00005 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Pral5426g00005 676 FunFam Cysteine-rich receptor-like protein kinase 10 139 247 - -
Pral5426g00005 676 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Pral5426g00005 676 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Pral5426g00005 676 MobiDBLite consensus disorder prediction 643 663 - -
Pral5426g00005 676 Gene3D - 25 130 IPR038408 -
Pral5426g00005 676 Gene3D - 147 247 IPR038408 -
Pral5426g00005 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Pral5426g00005 676 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00005 676 Gene3D Transferase(Phosphotransferase) domain 1 422 624 - -
Pral5426g00005 676 CDD STKc_IRAK 352 619 - -
Pral5426g00005 676 SUPERFAMILY Protein kinase-like (PK-like) 331 636 IPR011009 -
Pral5426g00005 676 Pfam Protein kinase domain 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00005 676 SMART serkin_6 346 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00005 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 316 421 - -
Pral5426g00005 676 ProSiteProfiles Gnk2-homologous domain profile. 135 247 IPR002902 -
Pral5426g00005 676 ProSiteProfiles Gnk2-homologous domain profile. 24 130 IPR002902 -
Pral5426g00005 676 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5426g00005 Pral-Chr5426 23472 26305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5426g00005 12 676 Receptor kinase-like Gene Family AT4G05200 42.878 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5426g00005 Pkinase 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5426g00005 - - cam:101500396 692.575