Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5426g00004 ATGGCGACTTCCAAATTCTGTGCATTCACTTCCTTCTTGGTGTTCCTAACCATCTTCTTCATCACAAGCAAAGCTTCTTTTAATTACACAGCTCATTACTGCTCAAACGCCACCATCGTCCCCGCCAACACTACATTCAAACGAAACCTCAACGTCCTCCTCTATTCCCTCACCTCCAACGCCTCCCAGTTCGGCGGCTACTACATGACCATCATGGGCTTCGGAACCACCGACGCCGTCAACGGCCTCTTCCTCTGTCGCGGGGACGTGATCTCCCCTACCGCCTGCGAAGACTGCGTCACCGCCGCTGCTAAGGACTTAACTACCCGTTGCCCTAACCGAACCGAGGCCATAATCTGGTACGACCAGTGCATGCTGCGTTACACTGGCAAGTATTTCCGGTACGACAGCGTCACACCCGGAGTAAACCTCGACGACGGCAAGAGATTCTCCGGCAGGGACTTGGAACAGTTCAATGTCTCGTTATTCAACTTATTGACTGATTTGACAACGAAGGCTGCGAGACCACCGACAGTGAAGAAGTTTGCCGTCGGCCAAGCGATATTATCGAGCTCGCCGGTGACGACGCTGTATGCTTTAGAGCAGTGCACGGATGACTTGACCAGTGATCAGTGTGAAACATGTCTGCGAAATGCCATTGGAATTTTCGGTAATTGCTGTGAGGGAAAACAAGGGGCGAGGGTTCTTCTTGCTTCGTGCTACATCAGATATGAACTATATCCGTTTTACAATGTAACGGCTGTATCACCTGGACCTGCAGTAACATTGTCTCCTTCTTCAGGCGAGGACAAAAATGAAACGCGAAGAATTCTTCTAATTGTCGTTCCAGTTTCGGTTGCTGTTATGATGCTGTGTTTGGGAGGGGCTTTCCTTCTGAAAATACGGAAGAAGCATAAGACTGCAGTACTTAATGAAAATCATGGAGAAGAAATTACCGCTCCAGAGTCGTTGCAATTCTCTTTTGCTACAATTGAAGCTGCCACAAACAATTTTTCACAGCTTAACAAAATAGGCAAAGGTGGATTTGGGGAAGTCTACAAGGGTGCGCTTCCAGATAAACGAGAAATAGCAGTTAAGAAACTTTCAAGTAAATCTAAGCAGGGTGTGGTGGAATTTAAAAATGAGATTTCACTTATTGCCAAGCTTCAACATAGAAATCTGGTTGCCTTATTTGGATTTTGCTTGCAAGAAGAGGAGAAAATGCTGATCTATGAATATGTGCCTAACAAAAGTCTTGATTTCTTTTTATTTGATTCTAATCCAAAGAGAAGGATATTGAATTGGTCTGAGCGATACAACATCATCGGAGGCATTGCAAGAGGAATTCTATATCTACATGAGCATTCACGACTCAAAGTTATACACCGTGATCTCAAGCCTAGTAATGTGTTATTAGATGATAAAATGAATCCAAAAATATCAGATTTTGGCTTAGCAAGAATAGTTGCTATAGATCAAAATCAAGGAAGTACTAGTAGAATTGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGATGTATATAGTTTTGGAGTTATAATTCTAGAAATAATTAGTGCAAAAAGAAATGCTCGATCCCCCAAGTCAAAGATTCTTGAAGATCTTTTAAGTCAGGCATGGAGACAATGGAGGAATCACACCCCACTGGAAGTTCTGGACACAAACCTTAAAGAATCATACTCTCACACTGAGGTCATAAAGTGCATTCAAATTGGGTTATTGTGTGTACAAGAAGACCCAGATGATAGACCCACAATGGCCACAGTTGTTTCATACCTCAATACCCAATTAATTGATTTGCCATTTCCAAGAGAACCTGCGCTCTTCAGGTACAGTGCTGGGAAATCAACGAACATGGTAGATGGAGATTGCAGTTCAGGACAATCCTCCATTGATTCCACACCTTCTTCCATCAATGACATGTCCAAGACTACTTTCTTCCCTCGATAG 2001 0.4333 MATSKFCAFTSFLVFLTIFFITSKASFNYTAHYCSNATIVPANTTFKRNLNVLLYSLTSNASQFGGYYMTIMGFGTTDAVNGLFLCRGDVISPTACEDCVTAAAKDLTTRCPNRTEAIIWYDQCMLRYTGKYFRYDSVTPGVNLDDGKRFSGRDLEQFNVSLFNLLTDLTTKAARPPTVKKFAVGQAILSSSPVTTLYALEQCTDDLTSDQCETCLRNAIGIFGNCCEGKQGARVLLASCYIRYELYPFYNVTAVSPGPAVTLSPSSGEDKNETRRILLIVVPVSVAVMMLCLGGAFLLKIRKKHKTAVLNENHGEEITAPESLQFSFATIEAATNNFSQLNKIGKGGFGEVYKGALPDKREIAVKKLSSKSKQGVVEFKNEISLIAKLQHRNLVALFGFCLQEEEKMLIYEYVPNKSLDFFLFDSNPKRRILNWSERYNIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDDKMNPKISDFGLARIVAIDQNQGSTSRIVGTYGYMSPEYAMHGQFSEKSDVYSFGVIILEIISAKRNARSPKSKILEDLLSQAWRQWRNHTPLEVLDTNLKESYSHTEVIKCIQIGLLCVQEDPDDRPTMATVVSYLNTQLIDLPFPREPALFRYSAGKSTNMVDGDCSSGQSSIDSTPSSINDMSKTTFFPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5426g00004 666 Gene3D - 148 249 IPR038408 -
Pral5426g00004 666 Gene3D - 26 133 IPR038408 -
Pral5426g00004 666 FunFam cysteine-rich receptor-like protein kinase 10 414 617 - -
Pral5426g00004 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 133 - -
Pral5426g00004 666 Gene3D Transferase(Phosphotransferase) domain 1 414 616 - -
Pral5426g00004 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 662 - -
Pral5426g00004 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral5426g00004 666 FunFam Cysteine-rich receptor-like protein kinase 10 142 249 - -
Pral5426g00004 666 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00004 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 413 - -
Pral5426g00004 666 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Pral5426g00004 666 MobiDBLite consensus disorder prediction 637 666 - -
Pral5426g00004 666 Pfam Protein tyrosine and serine/threonine kinase 341 610 IPR001245 GO:0004672|GO:0006468
Pral5426g00004 666 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Pral5426g00004 666 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Pral5426g00004 666 ProSiteProfiles Gnk2-homologous domain profile. 138 249 IPR002902 -
Pral5426g00004 666 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Pral5426g00004 666 SMART serkin_6 338 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00004 666 CDD STKc_IRAK 344 611 - -
Pral5426g00004 666 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Pral5426g00004 666 Pfam Salt stress response/antifungal 156 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5426g00004 Pral-Chr5426 16726 19970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5426g00004 12 666 Receptor kinase-like Gene Family AT4G05200 45.617 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5426g00004 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5426g00004 - - cam:101500396 758.829