Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5426g00003 ATGTTTCTCTTCAAAATTTATCCTCTTCTTCTTTTCACGTCCTTCTTGGCAACGCGAGCTCTCGCAGCTCCCGTTTACAATGGCCATTACTGCAACGACACGACCACGTACCCACCCAACTCCACATTTCAGCGTAATATTAATGTACTCCTCTCTTCTCTCACCTCCAACGCCTCCCTAGATTCCTCTGGTTCCTACAATACCGTCATGGGCTTCGGCACGCCCTACGCCGTCAACGGCTTCTTCCTTTGCCGCGGCGATATCACCATGCCCACCTGTCACGATTGCGTCAACGCCGCCGCCAAAGACGTTATTTCCCGATGCCCTAACCAAACTGAGGCCGTAATCTGGTACGACGTCTGCACGCTGCGTTTCACCAACATGTTCTTCCGGTTTGAGAGCGTCTTTCCCGGAATGAATTTGACGGATAAGGAGAGCGTATCTACCACCGATATTAACCGATTCAACCAGTCGTTGTTCAGATTGTTGGATGATTTGGACACGCGAGCTGCGAATTCGGAGACGGATAAGAAGTTCGCAACAGGGGAAGTGAGAGTTACGAGCTCGATGACTGTGTATGGGCTTGCGCAATGCTCGAAGGAAATGACATCCGAACAATGTGAAACCTGTTTGCAGAACGCCATTGGAGTTCTTCCGGCATGCTGTGAGGGAAAGCAAGGCGCGAGAGTTCTGCTTTCGCCCTGTAATGTCAGATACGAGTTGTTCCAGTTTTACAATTCAACCACTTCGTCACCTGGAAAGAAGAAATATGGATCAAGAACAATTGCAATGATTGTTATCCTTGTTGTTGTTTTTGTAATCCTCTTATGTTTAGGCTGCTATTTCCTGCTGAGAAGATCAAGGAAGAGTCATAGGACTATTCTCAGAGAACACTTTGGAAATGAAAGCGAGTCTTTGGAGTCATTGCAATTTAGTTTGGCTACAGTTGAAGCAGCAACAAACAAGTTTTCACAGCAGAATAAGATAGGCAAGGGTGGATTTGGAGAAGTTTACAAGGGTCGTCTTCAAGACGGACGAGAAATAGCAGTTAAAAAACTTTCTACAAGCTCAGGACAAGGTTCGATAGAATTCACAAATGAGATTTTACTCATAGCCAAGCTTCAACACAGGAATCTAGTGGCTTTGTTAGGATTTTGCTGGGAAGCAGAAGAGAAGATGCTTATCTATGAATATGTGCCCAACAGAAGCCTTGATTACTTTTTATTTGATTCTCAAAGGAGAAAACTACTGAACTGGGTTCAGCGTTATAGAATCTTGGAAGGAATTGCGCGAGGAATTCTTTATTTACATGAGTACTCAAGACTTAAAGTTATACACCGTGACCTTAAACCTAATAATGTGTTATTGGATGATAGTATGAATCCAAAGATTTCAGACTTTGGTTTGGCAAGAATAATTGCTATAGATGATGATCAAGGGAAAACAAGAAGAATAGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAGTCTGATGTATTCAGTTATGGGGTCATAACATTGGAGGTGATCAGTGCAAAAAGAAATGCCCGATCACTAGACTCACGTAGTGTTGATGACCTTATTAGTCATGCTTGGAGACAATGGAGGGATCAAACACCGTTAGAAATACTGGACCCAGATCTAAAAGAAGCTTGCCCGCAGAGCGAAGTCATGAAGTGTATTCAGATTGGTTTGTTATGCGTACAAGAAAAACCAAATGATCGACCCACAATGGCAAACGTTGTTTCATATTTTAATAGTCCTTCAGCCGAATTACCTCTACCTCGACAGCCAGCATTTTTGATGAACAATGTAATGGCAGGGGAATCCAGTTCAGGTTCTAGATCTTTATACTCGGTAAATGATTTGTCTATCAGTAATTCTTTCCCTCGGTGA 1923 0.4306 MFLFKIYPLLLFTSFLATRALAAPVYNGHYCNDTTTYPPNSTFQRNINVLLSSLTSNASLDSSGSYNTVMGFGTPYAVNGFFLCRGDITMPTCHDCVNAAAKDVISRCPNQTEAVIWYDVCTLRFTNMFFRFESVFPGMNLTDKESVSTTDINRFNQSLFRLLDDLDTRAANSETDKKFATGEVRVTSSMTVYGLAQCSKEMTSEQCETCLQNAIGVLPACCEGKQGARVLLSPCNVRYELFQFYNSTTSSPGKKKYGSRTIAMIVILVVVFVILLCLGCYFLLRRSRKSHRTILREHFGNESESLESLQFSLATVEAATNKFSQQNKIGKGGFGEVYKGRLQDGREIAVKKLSTSSGQGSIEFTNEILLIAKLQHRNLVALLGFCWEAEEKMLIYEYVPNRSLDYFLFDSQRRKLLNWVQRYRILEGIARGILYLHEYSRLKVIHRDLKPNNVLLDDSMNPKISDFGLARIIAIDDDQGKTRRIVGTYGYMSPEYAMHGQFSEKSDVFSYGVITLEVISAKRNARSLDSRSVDDLISHAWRQWRDQTPLEILDPDLKEACPQSEVMKCIQIGLLCVQEKPNDRPTMANVVSYFNSPSAELPLPRQPAFLMNNVMAGESSSGSRSLYSVNDLSISNSFPR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5426g00003 640 FunFam cysteine-rich receptor-like protein kinase 10 399 601 - -
Pral5426g00003 640 ProSiteProfiles Gnk2-homologous domain profile. 25 130 IPR002902 -
Pral5426g00003 640 ProSiteProfiles Protein kinase domain profile. 323 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00003 640 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 130 - -
Pral5426g00003 640 Pfam Salt stress response/antifungal 31 127 IPR002902 -
Pral5426g00003 640 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Pral5426g00003 640 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Pral5426g00003 640 SMART serkin_6 323 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00003 640 Gene3D Phosphorylase Kinase; domain 1 285 398 - -
Pral5426g00003 640 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 635 - -
Pral5426g00003 640 Pfam Protein tyrosine and serine/threonine kinase 325 592 IPR001245 GO:0004672|GO:0006468
Pral5426g00003 640 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 284 398 - -
Pral5426g00003 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Pral5426g00003 640 SUPERFAMILY Protein kinase-like (PK-like) 306 621 IPR011009 -
Pral5426g00003 640 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Pral5426g00003 640 CDD STKc_IRAK 329 595 - -
Pral5426g00003 640 Gene3D Transferase(Phosphotransferase) domain 1 399 601 - -
Pral5426g00003 640 Gene3D - 140 244 IPR038408 -
Pral5426g00003 640 Gene3D - 25 130 IPR038408 -
Pral5426g00003 640 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5426g00003 Pral-Chr5426 11140 14544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5426g00003 11 640 Receptor kinase-like Gene Family AT4G05200 44.162 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5426g00003 PK_Tyr_Ser-Thr 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5426g00003 - - ccaj:109813299 776.933