Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5426g00002 ATGCTTCTGTTCACAAACTCTCTTCTTTCCCTTACGACGTTTCTTTTCGCAACATTCTTGGCAACCCCAGCTCGCGCAACTCCCGTTTACAATGGCCATTACTGCAACAACACGGTCACGTATCAACCCAACTCCACATTTCAACGTAATATTAATGTACTCCTCTCTTCTCTCTCCTCCAACGCCTCCCAAGACTCCTCTGGCTCCTACGACACTGCCATGGGCGCCGGCACCCCCTTCGCCGTCAACGGTTACTACCTCTGCCGCGGCGATATCGCCATCGCCACTTGTCGAGACTGCGTTGCTGCCGCCGCCAATGACATCATTTCCCGATGCCCTAACCAAACAGAGGCTGTCCTCTGGTACGACATCTGCACGCTGCGTTTCACCAACTCGTACTTCAAGTCTGGAAGCGTTGTTCCCGGAACGAATTTGACAGACGGTAAAAGCGTATCTAACACTGACATTAGCCAATTCAACCAGTCGTTGTTCAGATTGTTGAATGATTTGGGGACACAAGCTGCTAATTCAGAGACGGCGAAGAAATTCGGGACTCGGGAAGTGAGGGTTACGAGGTCGATGACGGTGTACGGGCTTGCGCAATGCTCGGGGGAACTGAGCTCCCCACAATGTGAGACGTGTTTGCAGAATGCTGTCGGCGTTCTTCCGTCGTGCTGTGGGGGAAGACAAGGCGCGAGAGTTCTGCTTGCAACCTGTAATGTGAGATACGAGCTGTCCCAATTTTACAATTCAACCACTTCGTCACCAGGAAAGAAGAAATATGGATCAGGAACTATCGCCATGATTGTTATCCTTCCTCTTGTTTTTATAATTCTCTCGTGTTTAGGCTGCTATTTCCTGCTGGGCAGATCAAGGAAGAGTTACAAAACTACTCTAAGCGAACATTTTGGGAAAGAAACCGGCGCTTTGGAGTCATTGCAATTTAGTTTGGCTACGCTTGAAGTAGCGACAGACAAGTTTTCACACCAGAACAGGATTGGCCAAGGAGGATTTGGAGAAGTTTACAAGGGTGTTCTTCGAGACGGACAAGAAATAGCTGTTAAAAAGCTCTCTAAAACTTCAGGACAAGGTTCAATAGAATTCAAGAATGAGATTTTGCTCATAGCCAAGCTTCAGCACAGGAATCTAGTGGTTTTATTAGGATTTTGCTTGGAAGCAGAAGAAAAAATGCTTGTTTATGAATATGTGCCCAACAAAAGCCTTGATTATTTTTTATTCGATTCTCAAAGACAACCACTGAGTTGGGTTCAGCGTTACAGAATCATGGAAGGAATTGCTCGAGGAATTCTTTACTTACATGAGCACTCAAGACTCAAAGTTATACACCGCGATCTCAAACCTAGTAATGTGTTGTTGGATGATAACATGGATCCAAAAATCTCAGATTTTGGTATGGCAAGGATAGTTGCTATAGATCATGGTCAAGTGAAAACAAGAAGAATAGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAGTCTGACGTTTTTAGTTTTGGGGTCATAAGTTTGGAGGTAATTAGTGCAAAAAGAAATGCACGATCGCTTGACTCACATAATGTTGATGACCTTATCAGTCATGCTTGGAGACAGTGGAGGGATCAAACACCATTAGAAATCCTGGACCCAATTCTAAAAGAAGCTTGCCCACATAACGAAGTCATGAAGTGCATTCAGATTGGTTTGTTATGCGTCCAAGAAAATCCAAATGATAGACCCACAATGGCAAACGTTGTTTCATATTTTAGTAGTCCTTCAGCCGATCTGCCTCTCCCTCGACAACCAGCATTTTTTATGAACAATGGAATGGCAGGGGAATCCAGTTCAGGCTCTGCATGTTTATACTCCGTAAATGATTTGTCCATCACTAATTCTTTCCCTCGGTGA 1932 0.4451 MLLFTNSLLSLTTFLFATFLATPARATPVYNGHYCNNTVTYQPNSTFQRNINVLLSSLSSNASQDSSGSYDTAMGAGTPFAVNGYYLCRGDIAIATCRDCVAAAANDIISRCPNQTEAVLWYDICTLRFTNSYFKSGSVVPGTNLTDGKSVSNTDISQFNQSLFRLLNDLGTQAANSETAKKFGTREVRVTRSMTVYGLAQCSGELSSPQCETCLQNAVGVLPSCCGGRQGARVLLATCNVRYELSQFYNSTTSSPGKKKYGSGTIAMIVILPLVFIILSCLGCYFLLGRSRKSYKTTLSEHFGKETGALESLQFSLATLEVATDKFSHQNRIGQGGFGEVYKGVLRDGQEIAVKKLSKTSGQGSIEFKNEILLIAKLQHRNLVVLLGFCLEAEEKMLVYEYVPNKSLDYFLFDSQRQPLSWVQRYRIMEGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMDPKISDFGMARIVAIDHGQVKTRRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVISLEVISAKRNARSLDSHNVDDLISHAWRQWRDQTPLEILDPILKEACPHNEVMKCIQIGLLCVQENPNDRPTMANVVSYFSSPSADLPLPRQPAFFMNNGMAGESSSGSACLYSVNDLSITNSFPR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5426g00002 643 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Pral5426g00002 643 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Pral5426g00002 643 Pfam Protein tyrosine and serine/threonine kinase 330 595 IPR001245 GO:0004672|GO:0006468
Pral5426g00002 643 Gene3D - 144 248 IPR038408 -
Pral5426g00002 643 Gene3D - 29 134 IPR038408 -
Pral5426g00002 643 FunFam cysteine-rich receptor-like protein kinase 10 403 604 - -
Pral5426g00002 643 CDD STKc_IRAK 333 597 - -
Pral5426g00002 643 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 134 - -
Pral5426g00002 643 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Pral5426g00002 643 FunFam Cysteine-rich receptor-like protein kinase 10 143 248 - -
Pral5426g00002 643 ProSiteProfiles Protein kinase domain profile. 327 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00002 643 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Pral5426g00002 643 Gene3D Transferase(Phosphotransferase) domain 1 403 603 - -
Pral5426g00002 643 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Pral5426g00002 643 FunFam Cysteine-rich receptor-like protein kinase 10 290 402 - -
Pral5426g00002 643 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 638 - -
Pral5426g00002 643 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Pral5426g00002 643 SMART serkin_6 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00002 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Pral5426g00002 643 SUPERFAMILY Protein kinase-like (PK-like) 312 617 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5426g00002 Pral-Chr5426 5628 8910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5426g00002 4 643 Receptor kinase-like Gene Family AT4G05200 43.556 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5426g00002 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5426g00002 - - ccaj:109813299 772.311