Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00077 ATGAGCTTTGTTTTGAGAGGAACAAGAGCAGACATAGAAAGCGGATTTCCTGGATTTATTCCTGAGAGGCATGCATTGCGTGTTCATGCAGCACGACCTACTAATTCCAATTCACTTACTTTTCTTGTCACAGTTCTTCTGCTATTCATGATACTGAACTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTAGTGCTAGCTGTCTTCTTAATGGCTACAATGTTGAGGATGTACGCAACTTGTCAGCAGCTTCAAGCTGAGGCTCATGCCCATGCAGGAGCAGGCAGTGGTGGACTTCTTGGGCACACTGAAGTACGGTTACATATGCCACCATCAATGGCACTTACCACCCGAGGACGTCTACAAGGCCTAAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGATTTAGATTATGAAACTTTAAGAGCGCTGGATTCAGATAATGCTCCGCCTGCACCTTCTATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGCCTCCAAAAGAAATCCTCAATGCAGCAGACCTCATCTTCCACTTTTGCCGAGAAGAAGCATGATACATCAAATGCAGTTGGTAGTACAAAAGCCTCTGATGATGAGCTGACCTGCAGTGTATGTTTGGAGCAAGTTAACGTTGGGGATCTACTCCGTAGCTTGCCCTGCTTACATCAGTTTCATGCCAATTGCATCGACCCATGGCTGCGGCAACAAGGAACATGTCCTGTATGTAAATTCAGAGCAGGATCTACGTGGCATGAAAGTGAACAGAATGAAGTTGATGCTTCGGACATGGTTTGA 828 0.4517 MSFVLRGTRADIESGFPGFIPERHALRVHAARPTNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLAVFLMATMLRMYATCQQLQAEAHAHAGAGSGGLLGHTEVRLHMPPSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQKKSSMQQTSSSTFAEKKHDTSNAVGSTKASDDELTCSVCLEQVNVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWHESEQNEVDASDMV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00077 275 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Pral5423g00077 275 Pfam Ring finger domain 212 254 IPR001841 -
Pral5423g00077 275 MobiDBLite consensus disorder prediction 174 204 - -
Pral5423g00077 275 SMART ring_2 213 253 IPR001841 -
Pral5423g00077 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 258 IPR013083 -
Pral5423g00077 275 MobiDBLite consensus disorder prediction 176 204 - -
Pral5423g00077 275 CDD RING-H2_PA-TM-RING 212 254 - -
Pral5423g00077 275 SUPERFAMILY RING/U-box 208 257 - -
Pral5423g00077 275 PANTHER TARGET OF ERK KINASE MPK-1 2 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00077 Pral-Chr5423 406941 412189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00077 1 275 C3H Transcription Factor Family AT3G55530 72.924 1.62e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00077 K16283 - gmx:100777936 416.387