Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00074 ATGAGCTTTGTTTTGAGAGGAACAAGAGCAGACATAGAAAGCGGATTTCCTGGATTTATTCCTGAGAGGCATGCATTGCGTGTTCATGCAGCACGACCTACTAATTCCAATTCACTTACTTTTCTTGTCACAGTTCTTCTGCTATTCATGATACTGAACTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTAGTGCTAGCTGTCTTCTTAATGGCTACAATGTTGAGGATGTACGCAACTTGTCAGCAGCTTCAAGCTGAGGCTCATGCCCATGCAGGAGCAGGCAGTGGTGGACTTCTTGGGCACACTGAAGTACGGTTACATATGCCACCATCAATGGCACTTACCACCCGAGGACGTCTACAAGGCCTAAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGATTTAGATTATGAAACTTTAAGAGCGCTGGATTCAGATAATGCTCCGCCTGCACCTTCTATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGCCTCCAAAAGAAATCCTCAATGCAGCAGACCTCATCTTCCACTTTTGCCGAGAAGCATGATACATCAAATGCAGTTGGTAGTACAAAAGCCTCTGATGATGAGCTGACCTGCAGTGTATGTTTGGAGCAAGTTAACGTTGGGGATCTACTCCGTAGCTTGCCCTGCTTACATCAGTTTCATGCCAATTGCATCGACCCATGGCTGCGGCAACAAGGAACATGTCCTGTATGTAAATTCAGAGCAGGATCTACGTGGCATGAAAGTGAACAGAATGAAGTTGATGCTTCGGACATGGTTTGA 825 0.4521 MSFVLRGTRADIESGFPGFIPERHALRVHAARPTNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLAVFLMATMLRMYATCQQLQAEAHAHAGAGSGGLLGHTEVRLHMPPSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQKKSSMQQTSSSTFAEKHDTSNAVGSTKASDDELTCSVCLEQVNVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWHESEQNEVDASDMV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00074 274 SMART ring_2 212 252 IPR001841 -
Pral5423g00074 274 CDD RING-H2_PA-TM-RING 211 253 - -
Pral5423g00074 274 PANTHER TARGET OF ERK KINASE MPK-1 2 258 - -
Pral5423g00074 274 MobiDBLite consensus disorder prediction 174 204 - -
Pral5423g00074 274 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Pral5423g00074 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 257 IPR013083 -
Pral5423g00074 274 MobiDBLite consensus disorder prediction 176 204 - -
Pral5423g00074 274 Pfam Ring finger domain 211 253 IPR001841 -
Pral5423g00074 274 SUPERFAMILY RING/U-box 207 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00074 Pral-Chr5423 406940 412189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00074 1 274 C3H Transcription Factor Family AT3G55530 72.924 3.22e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00074 K16283 - gmx:100777936 409.838