Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00056 ATGCAAAAGTACATGGTTAGGACAGCGACAGGGCTTGGCTCTTCATGTGGAGCATGCAAGTTCCTCAGGAGAAAGTGTACTGCTGATTGCATATTTGCTCCTTACTTCTCCTATGATCAGGCTGCAACCCATTTTGCAGCAGTTCACAAGGTTTTTGGTGCTAGTAATGTCTCTAGGCTTCTGCTACACCTACCAGTGCAGAGCAGAAGTGATGCAGCCATCACTGTGTCCTACGAGGCACTCGCTCGGATGCATGATCCCGTATATGGTTGTGTTGCTCAAATCTTTGCCCTACAGCAACAGGTTGCAAGCTTACAAGATGAAATAGATAAACTTAGTAATATGATGGCCAACTCTCCTGTTGGTGCTGCCATTTCTGGTGGCAGTTCTCAAGCCTCAACAAGCAGAAACACAGATGGGATAGATTTTACTTGGCAGCAAGATGCATCAAATACACAACTTTATCATAATCAATTATCTACTCTGTTTTCTCACCAAGAAAGTGGTGTAGCCTACCAAGGCTTGGAAGGACAGGTGAATCTGGGTTTTCCAGATACTCTTCAATTTGAAGACCATGTATTTGATGAGTCCGACCCTAATTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATCATCCTTGA 657 0.4384 MQKYMVRTATGLGSSCGACKFLRRKCTADCIFAPYFSYDQAATHFAAVHKVFGASNVSRLLLHLPVQSRSDAAITVSYEALARMHDPVYGCVAQIFALQQQVASLQDEIDKLSNMMANSPVGAAISGGSSQASTSRNTDGIDFTWQQDASNTQLYHNQLSTLFSHQESGVAYQGLEGQVNLGFPDTLQFEDHVFDESDPNSLEKLLSGIDQQVFINHP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00056 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 156 - -
Pral5423g00056 218 Coils Coil 95 115 - -
Pral5423g00056 218 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Pral5423g00056 218 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00056 Pral-Chr5423 317713 318823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00056 13 118 AS2 family AT5G06080 73.585 1.43e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5423g00056 LOB 2.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00056 K13945 - pop:7490379 241.891