Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00050 ATGGCGAATCGGTGGTGGGCTGGTAACGTGGCAATGAGACCGAAAGATCCTTTGTCGTCTTCTCCATCACTTCATCTGAGAAACCCGGAAGATGATCATGGTGGGTTGAACCGGTTCGGTGCTGTACGAGTACAAGACTTTCTGGAAAACAATAATAACACCACTCCAACCAATAGCAGTAACAGCAACACTAACGCCAACACAAACACCACCTCGCAGAGCCAGAACGCCGACGACGGCGACAGCCGAGATAACGGCCGCGAAGCTGATGATCAGAACCCGGGTAGCCATGACGGCACGGAGCCGGGAAGCACTGGTCGGCGCCCTCGAGGACGCCCTGCTGGGTCGAAGAACAAGCCGAAGCCACCTGTGGTTGTGACAAAGGAGAGTCCTAATGCCCTCCGGAGCCACGTGTTGGAAATCTCCAGCGGCAGCGATGTTGCTGAGAGCCTCGCCACCTTCGCCAACCGGAGACACCGTGGGGTGTCAGTGCTCAGCGGAAGTGGCATCGTAACCAACGTCACTCTCCGGCAACCGGCAGCACCAGGTGGAGTCATCACACTAAATGGAAGGTTCGAGATTCTGTCTCTATCCGGCGCATTTTTGCCTGCCCCTTCGCCACCTGGGGCCACCGGGCTAACTGTGTATCTCGCCGGCGGCCAAGGGCAGGTTGTCGGTGGAGCTGTGGTGGGTTCACTGGTAGCGTCGGGTCCCGTGTTGGTAATTGCAGCCACATTCGCTAATGCCACTTATGAGAGATTGCCACTTGAGGATGAGCCATCCGGGGAAGAAGTTGAAGCGAAAACACAGCAACAATCAGCAGGAGTGAATTCAGCAACTTCTGGGCCTCCTCCTTCAGCATCTCAAGCTTTGAACGAACAAGTTTCGATGCCTATGTTCAGTAATTTGCCTCCTAATTTGCTACCAAACAATGATCAAATGCAACATGACGTGTTCTGGGGGAATCCTGCTCGCCATCCTCCTTCTTACTGA 993 0.5468 MANRWWAGNVAMRPKDPLSSSPSLHLRNPEDDHGGLNRFGAVRVQDFLENNNNTTPTNSSNSNTNANTNTTSQSQNADDGDSRDNGREADDQNPGSHDGTEPGSTGRRPRGRPAGSKNKPKPPVVVTKESPNALRSHVLEISSGSDVAESLATFANRRHRGVSVLSGSGIVTNVTLRQPAAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVVGSLVASGPVLVIAATFANATYERLPLEDEPSGEEVEAKTQQQSAGVNSATSGPPPSASQALNEQVSMPMFSNLPPNLLPNNDQMQHDVFWGNPARHPPSY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00050 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 258 - -
Pral5423g00050 330 PIRSF ESCAROLA 46 330 IPR014476 GO:0003680
Pral5423g00050 330 ProSiteProfiles PPC domain profile profile. 131 269 IPR005175 -
Pral5423g00050 330 MobiDBLite consensus disorder prediction 266 317 - -
Pral5423g00050 330 MobiDBLite consensus disorder prediction 80 95 - -
Pral5423g00050 330 MobiDBLite consensus disorder prediction 257 330 - -
Pral5423g00050 330 FunFam AT-hook motif nuclear-localized protein 134 261 - -
Pral5423g00050 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 247 IPR005175 -
Pral5423g00050 330 Gene3D - 134 269 - -
Pral5423g00050 330 CDD DUF296 135 217 IPR005175 -
Pral5423g00050 330 MobiDBLite consensus disorder prediction 46 79 - -
Pral5423g00050 330 MobiDBLite consensus disorder prediction 1 131 - -
Pral5423g00050 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 64 322 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00050 Pral-Chr5423 282413 284456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00050 1 330 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 53.529 1.47e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00050 - - qsa:O6P43_020634 398.667