Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00035 ATGGAGGGATCTCACCTTCATCATCATCATCACCATCATCATCAGTATTTGATGTGGCTGAAGAGGAAGCAAATGTTGAGGTCACATATTGAAGCGGCTAGACCATGGGAAGAGAGGGCTTTTGCAGAAGACGCAGCTAGGATACTTGGTGGGTACGTTTGGCCTCCGAGATCCTACTCTTGTAGTTTCTGCAAAAGAGAGTTCAGGTCTGCACAAGCTCTTGGGGGTCACATGAATGTTCACAGGAGGGATAGAGCTAGGCTCAAACAGAGCCAACAAAGTGTTCCTAAGGGATCTTCTGATTCAGATGTAATCGTCGTCAATGGAAGGGAAGAAGATTTTGCAGGCTTCAGTCATGGGAATAATAATAATAATTATGTTGATACAGACCTGTCCGTGGGATTACTACCTGCATCAGCTGAAGAAGCTTTAAGTTGCAAGAAACCCAAGACTTCCAATATTTCTTCAGTACAGCTTCCTGTCCTCATCAAACCATTCTCGAACGATCACGCAAGCCTGGTTTTCCAATCTGCAGAAATGGTAATCGGAGTTAATAAGCCTAAGATGGAAGACTTGGATCTTGAACTCAGGCTGGGGAAGCCACAGAAAGTTAAGTGA 618 0.445 MEGSHLHHHHHHHHQYLMWLKRKQMLRSHIEAARPWEERAFAEDAARILGGYVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKQSQQSVPKGSSDSDVIVVNGREEDFAGFSHGNNNNNYVDTDLSVGLLPASAEEALSCKKPKTSNISSVQLPVLIKPFSNDHASLVFQSAEMVIGVNKPKMEDLDLELRLGKPQKVK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00035 205 SMART c2h2final6 59 81 IPR013087 -
Pral5423g00035 205 Gene3D Classic Zinc Finger 56 114 - -
Pral5423g00035 205 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Pral5423g00035 205 SUPERFAMILY beta-beta-alpha zinc fingers 56 85 IPR036236 -
Pral5423g00035 205 PANTHER OS07G0101800 PROTEIN 34 202 - -
Pral5423g00035 205 MobiDBLite consensus disorder prediction 82 102 - -
Pral5423g00035 205 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Pral5423g00035 205 Pfam C2H2-type zinc finger 59 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00035 Pral-Chr5423 244651 245268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00035 15 204 C2H2 Transcription Factor Family AT5G06070 37.500 1.89e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00035 - - pcin:129304252 209.534