Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00034 ATGGCTGGGATATGCTGTGGTGTTGTTGGAGAAGGGGAGACTCCGACTCCGATTGAGCCGGGACGACCTTCTCGGAGACGGAGGTTGGATATAATGCCCTTGAAGCTTATGGCTGACATGGCCGTGCTGCCGCCTGACACTTGCCTGAAGCGCCAAAAGCTGGATCTCTGTGCTAATTCTCCGCCGCAACCAAGAGACTGCGTAAACGCAGTTGAGAATTGTGAATCTGGTGGTGTTAAGACGGTAGAGGAAGAAAACAGGAAGGAACAGAAAGGGGACGAAGCTGTGTCGACGGTTACTTCTTTAAATTCAACTGCTACAAAAGATTGTGATAATGAGGATATTCGTGAGTGTCCAAAGTTTGGGGTTACATCGGTTTGTGGTAGAAGGAGGGATATGGAAGACGCGGTTTCAGTTCGTCCGTCGTTCTGCCAAGAACAGGGTCAAAATACAAACGAGTTTCATTACTTCGGTGTGTTCGACGGCCATGGTTGCTCTCATGTAGCGACGATCTGTAAGGATAGGTTGCATGAGATTGTGAAGGAAGAGGTCGGCGGAGCACGAGAGGATTTGGAGTGGAAGTCTATGATGGAACAGAGTTTCGCTCGGATGGACGAGGAGGTGCAGAACTGGAGCCAAAGCAACCAGAACTCCACTTGTAGGTGCGAGCTACAGTCGCCTCACTGCGACGCCGTTGGATCTACCGCGGTTGTTGCTGTCGTTACGCCGGACAAGATCATTGTCTCCAACTGTGGCGACTCCCGCGCTGTTCTCTGCCGTAACGGCGTCGCCGTCCCCCTGTCGTCCGATCACAAGCCCGACCGACCTGACGAGTTGCTTCGAGTTCAAGCCGCCGGAGGACGGGTCATTTATTGGGACGGTCCTAGGGTTCTCGGAGTTTTGGCAATGTCCAGAGCCATAGGCGACAATTATCTTAAACCTTACGTTATATCGGAGCCGGAGGTGACGGTGACGGAGCGCACAGATGAGGACGAGTGTTTGATACTTGCAAGCGACGGCCTGTGGGACGTGGTGTCAAACGACACCGCATGCGGGGTGGTGCGGATGTGCCTGAAGGTGCAGAAACCGCCGTCACCGCCAGGATCGCCGGGAAGCGACATGGCGGTGTACTCCGCGGCAGATGGGTCGGACAAGGCATGTTCGGACGCATCCATTTTGCTGACGAAGTTGGCTTTGGCCCGGCATAGTACGGACAATGTGAGCGTCGTGGTGGTGGATTTGAGGAAAGAGAAACCACAATGTAACTCCGACGAGGCGAACAATAATTAA 1290 0.5357 MAGICCGVVGEGETPTPIEPGRPSRRRRLDIMPLKLMADMAVLPPDTCLKRQKLDLCANSPPQPRDCVNAVENCESGGVKTVEEENRKEQKGDEAVSTVTSLNSTATKDCDNEDIRECPKFGVTSVCGRRRDMEDAVSVRPSFCQEQGQNTNEFHYFGVFDGHGCSHVATICKDRLHEIVKEEVGGAREDLEWKSMMEQSFARMDEEVQNWSQSNQNSTCRCELQSPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAVYSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRKEKPQCNSDEANNN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00034 429 PANTHER PROTEIN PHOSPHATASE 97 414 IPR015655 GO:0004722|GO:0006470
Pral5423g00034 429 SMART PP2C_4 108 412 IPR001932 -
Pral5423g00034 429 FunFam Protein phosphatase 2C 37 115 421 - -
Pral5423g00034 429 Pfam Protein phosphatase 2C 121 406 IPR001932 -
Pral5423g00034 429 Gene3D - 115 422 IPR036457 -
Pral5423g00034 429 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Pral5423g00034 429 SUPERFAMILY PP2C-like 120 415 IPR036457 -
Pral5423g00034 429 CDD PP2Cc 120 414 IPR001932 -
Pral5423g00034 429 ProSiteProfiles PPM-type phosphatase domain profile. 120 414 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00034 Pral-Chr5423 228376 230676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00034 1 418 PP2C-type Phosphatase Gene Family AT3G11410 59.535 7.19e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00034 K14497 - gmx:100776356 582.022