Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00017 ATGAAATGGTTTAGTAAGCTTTTCAAAGGTGGGTCCAGTCGAGGAAGGGGAGGTCGTCATCTCCAGCAGCCTACAGAGGAAAATTTGGTCTGGCGCAATCCATCTAGATCTTTGGATGACCGTTCTAGAGCTCAGAAGGACAAAGAGGATCTGGACCGTGCAATTGCACTATCGTTAGCTGAAGATTTGAAGAGACCAAATGCTCGCCAAGGATATAGATGCCATGGAAACTTCGACGAAGATTATGCGGGTGAATTTCAGGATAACCAGAACTCCTCTGCACATCCTCCTTATACCCGTGCAACATGTGGGGAAATTAGGACATGTGGTGGGTGCAAGCGGGAGATAGCCCATGGGAATTGTTTAAAGTGCAATAATACTTTTTTCCATCCAGGGTGCTTTCGTTGTCACTCTTGTCGCTACCCCATTACTGAGCATGAGTTTTCTTTATCAGGGAAGCATCCATATCACAAGTCCTGTTTCAAAGAGTTGACCCACCCAAAATGTGAAGTTTGCTACCGATTTATTCCTATAAATGCTGCTGGTTTGATTGAGTATAGGTGTCATCCTTTTTGGTCCCAAAAATATTGTCCAGCTCATGAATATGATGATACGGCTCGCTGCTGTAGTTGTGAAAGATTGGAGTCTTTGAATACGAAATACTATAGTTTGGAAGATGGACGGAGTTTATGTTTAGAGTGCATGGAGTCAGCTATTATGGACACCGGAGATTGTCAACCTCTTTACCATGCTATTAGAGATTATTATGAAGGAATGAATATGAAAATAGACCAACAAATTCCTATGCTTCTGGTTGAGAGGCAAGCACTCAATGAAGCTATTGTTGGGGATACAAATGGTTACCATCATATGCCAGAGACAAGAGGCTTGTGCCTTTCTGAAGAGCTGACTGTCACCAGTGTTCATCGAAGACCAGGAATTGGAGGCCATAGGCTAATGGGCATGAGAACCCAACCTCAAAAACTATCTAGAAAATGTGAAGTTACAGCCATTCTTGTTCTCTATGGTCTTCCCAGGTTACTCACAGGCGCTATCCTTGCCCACGAGCTGATGCATGGCTGGTTACGCCTTAAAGGGTACCGTAATCTTAATCCTGAAGTAGAGGAAGGAATCTGTCAGGTTCTTTCTTATATGTGGCTTGAGTCAGAAGTGATGCCTGGCCTTAAAAGCATGCCTTCAACTTCAGGAGCTTCTTCTTCCTCATCTTCCTACTACTCCTCATCATCTAAGAAAGGAACTAAATCTGAAGTTGAAAATAAACTGGGTCAGTTTTTCATGAATCAGATTGCCAATGATTCTTCCCCAGCATATGGGGGTGGCTTTAGAGCTGCTAATGAGGCAGTGAACAAATATGGTTTACGTAGTACTCTTGAACATATTCGTTGGACTGGTAATTTCCCACTGTAA 1428 0.4314 MKWFSKLFKGGSSRGRGGRHLQQPTEENLVWRNPSRSLDDRSRAQKDKEDLDRAIALSLAEDLKRPNARQGYRCHGNFDEDYAGEFQDNQNSSAHPPYTRATCGEIRTCGGCKREIAHGNCLKCNNTFFHPGCFRCHSCRYPITEHEFSLSGKHPYHKSCFKELTHPKCEVCYRFIPINAAGLIEYRCHPFWSQKYCPAHEYDDTARCCSCERLESLNTKYYSLEDGRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKIDQQIPMLLVERQALNEAIVGDTNGYHHMPETRGLCLSEELTVTSVHRRPGIGGHRLMGMRTQPQKLSRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPGLKSMPSTSGASSSSSSYYSSSSKKGTKSEVENKLGQFFMNQIANDSSPAYGGGFRAANEAVNKYGLRSTLEHIRWTGNFPL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00017 475 Gene3D Cysteine Rich Protein 101 168 - -
Pral5423g00017 475 MobiDBLite consensus disorder prediction 397 418 - -
Pral5423g00017 475 Pfam LIM domain 109 162 IPR001781 -
Pral5423g00017 475 PANTHER PROTEIN DA1-RELATED 2 3 474 IPR045218 -
Pral5423g00017 475 MobiDBLite consensus disorder prediction 33 49 - -
Pral5423g00017 475 ProSiteProfiles LIM domain profile. 107 167 IPR001781 -
Pral5423g00017 475 CDD LIM_DA1 109 161 - -
Pral5423g00017 475 Pfam Protein DA1 258 469 IPR022087 -
Pral5423g00017 475 ProSitePatterns LIM zinc-binding domain signature. 109 143 IPR001781 -
Pral5423g00017 475 MobiDBLite consensus disorder prediction 9 49 - -
Pral5423g00017 475 SMART lim_4 108 160 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00017 Pral-Chr5423 115471 121429 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5423g00017 DA1-like 3.2e-100 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00017 - - gmx:100784976 759.599