Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00003 ATGTTTTCTCTAAGCACCTGCCATCTCCTCCTTTCTCTCTTTTGCGGTCTCCTTATTATTCAGACGCATTGCGATGATCCAAATATACGGACATACATCGTGTACATGGGGGATCATGCGAAGGAAATGAAAGACGTCGCAGAATTACATCACACGAGTATGGTTCAAAAAGTCCTTGGCAGAAACTTTGCACCAGAAACTCTGCTGCACAGCTACAAGAAGAGTTTCAATGGATTTGCGGTGAGGTTAACACCAGAGCAAGCTGAAAGGATGGCCGAAATGGATGGGGTGATCTCTGTTTTCCTAAGCGAAAAGCACAAGCTCCAAACAACGCGGTCATGGGACTTCATAGGTTTTCCACAGCAAGTGAACAGAACAAGTGTGGAGAGTGACATCATTGTCGGAGTAATCGATACCGGAATTTGGCCCGAGTCAGATAGCTTCAACGACCGAGGATTTAGTTCACCACCAAGAAAATGGAAAGGCTCTTGCCAAAACATCACTTGCAATAACAAGATAATTGGAGCAAAATACTTTCGGGTGGATGTTACAGTTGGCGAAGATGATATTAAATCTCCAAGGGATTTGGATGGCCATGGCACTCACTGTGCCTCCACAGCTGCAGGAAACCTGGTTAGCTCAGCAAGTCTATATGGGCTGGGCTCGGGCACCGCGAGAGGGGGAGTACCATCAGCTCGCATTGCTGTGTACAAACCCTGTTGGTCATCAGGTTGTAATACAGCTGACATTCTGGCAGCATTTGACGAAGCAATCGCTGATGGCGTCGACATACTTTCTGTATCACTTGGCTATCAATCTGTGACACATCGTGACTTGTTTGGGGACGTGTACGCAATTGGATCTTTCCATGCAATGAAGAATGGAATTCTAACCTCAACTTCTGGCAACAACTTGGGTCCAAACCTTTCGACCACCACTAAAGCTGCTCCCTGGATGCTTTCTGTGGCTGCATCCACGATAGATAGAAAGTTCTTCACCAAGGTTCAATTGGGAAATGACATGGTTTTTGAGGGAATTTCGACGAACACCTTTGATCTCCAAAATAAAACTTACCCCTTGATTTACTCTGGAGATGCACCCAATATCACTGGTGGATTTAACAGTTCGATATCAAGGTTTTGCATTGAAAACTCGTTGGATGAAGCGATGGTGAAGGGGAAAATCGTTTTGTGTGATAGGCTTCCAGATGATGCTACAGGACTAGTGTCTGGGGCGGTTGGGGTTGTGGTTCTGGCCAATTACCCAACAGATTCAGCATCTCGCTTTGCTTTTCCTCTTGCTCTCGCTATGCTTAATCTAAATGATGGCTTGCCCATTCTCTCTTACTTGTCTTCTTCAAGCAATCCAACTGCTACTATATATAAGAGTAATGAAGGCAAAGATCCTTTCTCCCCTTACATAGCTTCCTTTTCTTCAAGGGGTCCAAACACAATTATTCCCAACATTCTCAAGCCTGATATAGCTGCCCCAGGAGTAGATATCATAGCCGCTTGGTCTCCCATTTCGCCTATTTCAGGTGTGAAAGGAGACAAGAGGGAGTCAAACTTCAATATAATATCAGGAACTTCCATGGCTTGCCCTCATGCTACTGCAGCAGCCATATATGTCAAGTCATTTCATCCCACTTGGTCTCCAGCAGCAATCAAGTCTGCCTTAATGACTACTGCCACTCCAATGAGTTCCGCTCTCAACCCTGAAGCTGAATTTGCATATGGAGCTGGACAAATTAATCCCATCAAGGCTGTGACCCCTGGCTTGGTATATGATATCAGTGAATCTGATTGCGTGAGGTTTTTGTGTGGGCAAGGTTATAATGCGACAAACCTACGAATCATTACACAGGATGTCATCGACTGTGAGGAAACTAAGGTTGAAACAGTGTGGGACCTCAATCTCCCATCTTTTGCTCTTAAGAGAAACATCTCAGAACCTTTTGTCAGTGTGTTTCATAGAACTGTGACTAACGTTGGAGCAGCTACATCTATATATCAGGCCGAAGTGATTGTTCCTCCATCTTTGCTAACGTTAACCATCAAAGTGGCACCAGATGTTTTGTCTTTTTCATCTGAGGGTGAGAAGAAGTCATTTACAGTTACAGTTGAAGGAACTATAAATGTGGGAATGATCTCCGCATCTTTGATTTGGGATGATGGCAATTTCCAAGTGAGAAGCCCCATGGTGGTTTATAGTATTGAGTGA 2220 0.4455 MFSLSTCHLLLSLFCGLLIIQTHCDDPNIRTYIVYMGDHAKEMKDVAELHHTSMVQKVLGRNFAPETLLHSYKKSFNGFAVRLTPEQAERMAEMDGVISVFLSEKHKLQTTRSWDFIGFPQQVNRTSVESDIIVGVIDTGIWPESDSFNDRGFSSPPRKWKGSCQNITCNNKIIGAKYFRVDVTVGEDDIKSPRDLDGHGTHCASTAAGNLVSSASLYGLGSGTARGGVPSARIAVYKPCWSSGCNTADILAAFDEAIADGVDILSVSLGYQSVTHRDLFGDVYAIGSFHAMKNGILTSTSGNNLGPNLSTTTKAAPWMLSVAASTIDRKFFTKVQLGNDMVFEGISTNTFDLQNKTYPLIYSGDAPNITGGFNSSISRFCIENSLDEAMVKGKIVLCDRLPDDATGLVSGAVGVVVLANYPTDSASRFAFPLALAMLNLNDGLPILSYLSSSSNPTATIYKSNEGKDPFSPYIASFSSRGPNTIIPNILKPDIAAPGVDIIAAWSPISPISGVKGDKRESNFNIISGTSMACPHATAAAIYVKSFHPTWSPAAIKSALMTTATPMSSALNPEAEFAYGAGQINPIKAVTPGLVYDISESDCVRFLCGQGYNATNLRIITQDVIDCEETKVETVWDLNLPSFALKRNISEPFVSVFHRTVTNVGAATSIYQAEVIVPPSLLTLTIKVAPDVLSFSSEGEKKSFTVTVEGTINVGMISASLIWDDGNFQVRSPMVVYSIE 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00003 739 SUPERFAMILY Subtilisin-like 108 593 IPR036852 GO:0004252|GO:0006508
Pral5423g00003 739 CDD Peptidases_S8_3 106 564 IPR034197 -
Pral5423g00003 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Pral5423g00003 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 109 IPR037045 -
Pral5423g00003 739 Pfam Subtilase family 130 581 IPR000209 GO:0006508|GO:0008236
Pral5423g00003 739 CDD PA_subtilisin_like 335 460 - -
Pral5423g00003 739 FunFam Subtilisin-like protease SBT1.5 131 338 - -
Pral5423g00003 739 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Pral5423g00003 739 Pfam Fibronectin type-III domain 636 735 IPR041469 -
Pral5423g00003 739 Gene3D - 606 738 - -
Pral5423g00003 739 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Pral5423g00003 739 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Pral5423g00003 739 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Pral5423g00003 739 ProSiteProfiles Serine proteases, subtilase domain profile. 113 589 - -
Pral5423g00003 739 Gene3D Peptidase S8/S53 domain 131 601 IPR036852 GO:0004252|GO:0006508
Pral5423g00003 739 Gene3D - 328 467 - -
Pral5423g00003 739 FunFam Subtilisin-like protease SBT5.3 21 109 - -
Pral5423g00003 739 ProSitePatterns Serine proteases, subtilase family, histidine active site. 199 209 IPR022398 -
Pral5423g00003 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 735 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00003 Pral-Chr5423 28272 31818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00003 25 738 Subtilisin-like Serine Gene Family AT5G59100 46.694 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00003 - - gmx:100801111 978.778