Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5423g00002 ATGGGCGAAGAAACAGGCCCAAGTCATTTGAAGATTGTTATTCAGAGAAAAAGGGGGTACATAGGCCTCAAGACAAAGACGTATATCGTGTACATGGGGGATCATCCGAAGGAAATGAAAGTCGCTGAATTACATCACATGAGTATGGTTCAAAGAGTCCTTGGCAGAAACTTCGCACCAGAATCACTGCTCCACAGCTACAAGAAGAGTTTCAGCGCATTTGCGGTGAGGCTAACACAAAAGCAAGCTGAAAGAATGGCCGGAATGGATGGGGTGATCTCTGTGTTCCAAAGCAAAACTCACAAGCTCCAAACAACAAGGTCGTGGGACTTCATAGGGTTTCCACAGCAAGTGAACAGAACAAGTGTGGAGAGCGACATCATCGTCGGAGTAATCGACTATGGAATTTGGCCCGAGTCTGAAAGCTTCAACGACCAAGGATTTAGTTCACCTCCAAGAAAGTGGAAAGGCTCTTGCCAAAACATCACTTGCAATAACAAGATAATTGGAGCAAAATATTTTCGGGTGGATGGTACATTTGAAGAAGATGATATTAGATCTCCAAGGGATTCAGATGGCCACGGCACTCATTGTGCATCCACAGCTGCAGGAAACTTGATTAGCTCAGCGAATCTATATGGGTTAGGCTCGGGCACTGCAAGAGGGGGAGTCCCATCAGCTCGTATTGCTGTGTACAAACCTTGTTGGTCAAAAGGTTGTAATACAGCTGACATTCTGGCAGCATTTGACGAAGCAATCTCTGATGGCGTCGACATACTTTCTGTATCCCTTGGCTCTCGTACGCTGATACACCGTGACTTGTTTGAGGATGTGTACGCAATTGGATCTTTCCATGCAATGAAGAAGGGCATTTTAACCTCAATTGCTGCCGGCAACTTGGGTCCAAAGCTTTCCACCATGACAAGTTTTGCGCCCTGGTCGCTTTCAGTGGCTGCTTCCACTACTGATAGAAAGTTTACCACCAAGGTTCAGTTGGGAAATGGCATAGTTCTTCACGGAATTTCGTTGAACACCTTTGATCCCCAAAATGGAACTTACTCCTTGATTTACTCTGGAGATGCGCCAAATATCACTGGTGGATTTAACAGTTCTACTTCGAGGCTATGCTCCGAGGACTCGTTGGACGAAGCGATGGTGAAGGGAAAAATTGTTTTGTGTGATGGACTTTCCATCAGTGATGCTGCAGGACTGTCAGGAGCGGTTGGCGTTGTGCTTCCAACCATTTCCTCAAAAGATGCGCCATCTCTTTATCGTTTTCCTTTTCCACTCGCTTTGCTTACTCTAAATGATGGCACAACCATTCGCTCTTACCTGGATTCTACCAGAAATCCAACTGTTGCTATTTTCAAGAGCAAGGAAGGCAAAGATTCTCTGTCCCCTTACGTAGCTTCCTTTTCTTCAAGGGGTCCAAACGTAATTACTCCCAACATTCTCAAGCCTGATATAGCAGCACCAGGAGTAGATATCATAGCCGCATGGTCTGGCATTTCCCCTGTTTCAAAAGTGAAAGGAGATAAGAGATTATCAAACTTCAATATAATATCAGGAACTTCCATGGCTTGCCCTCACGCTACTGCAGCAGCCGCCTACGTCAAGTCATTTCATCCTACATGGTCTCCAGCAGCAATCAAATCTGCCTTAATGACCACTACCACTCTGATGAGTTCTGCTCTCAACCCAGAAGCTGAATTTGCATATGGAGCTGGACAAATTAATCCCATTAAGGCAGTGACCCCTGGTTTGGTCTACGATATTGGTGAATCAGATTATGTGAGGTTCCTGTGTGGACAGGGTTATAACAGGACAAGCCTAAGAAGCATTACAGATGAAGACGTCAACTGTAAGAAATCTGAGAACGAAACGGTTTGGGACCTCAATCTCCCATCTTTCGCTCTTGAGAGAAACATCTCAGAACCTTTTACCAGTGTGTTTCATAGAACTGTGACAAATGTTGGAGCAGCTACATCTGTATATAAGGCGAAAGTGATTGTTCCGCCATCTTTGCTGACTATTCAAGTGACCCCAAATGTTTTGTCGTTCTCGTCTGTGGGTGAGAAGAAGTCGTTCACAGTAAACGTGGGAATAGTCTCTGCTTCTTTGATTTGGGATGATGACAATTTCCAAGTGAGGAGCCCCATTGTGGTTTACAGTACTCAGTGA 2181 0.4507 MGEETGPSHLKIVIQRKRGYIGLKTKTYIVYMGDHPKEMKVAELHHMSMVQRVLGRNFAPESLLHSYKKSFSAFAVRLTQKQAERMAGMDGVISVFQSKTHKLQTTRSWDFIGFPQQVNRTSVESDIIVGVIDYGIWPESESFNDQGFSSPPRKWKGSCQNITCNNKIIGAKYFRVDGTFEEDDIRSPRDSDGHGTHCASTAAGNLISSANLYGLGSGTARGGVPSARIAVYKPCWSKGCNTADILAAFDEAISDGVDILSVSLGSRTLIHRDLFEDVYAIGSFHAMKKGILTSIAAGNLGPKLSTMTSFAPWSLSVAASTTDRKFTTKVQLGNGIVLHGISLNTFDPQNGTYSLIYSGDAPNITGGFNSSTSRLCSEDSLDEAMVKGKIVLCDGLSISDAAGLSGAVGVVLPTISSKDAPSLYRFPFPLALLTLNDGTTIRSYLDSTRNPTVAIFKSKEGKDSLSPYVASFSSRGPNVITPNILKPDIAAPGVDIIAAWSGISPVSKVKGDKRLSNFNIISGTSMACPHATAAAAYVKSFHPTWSPAAIKSALMTTTTLMSSALNPEAEFAYGAGQINPIKAVTPGLVYDIGESDYVRFLCGQGYNRTSLRSITDEDVNCKKSENETVWDLNLPSFALERNISEPFTSVFHRTVTNVGAATSVYKAKVIVPPSLLTIQVTPNVLSFSSVGEKKSFTVNVGIVSASLIWDDDNFQVRSPIVVYSTQ 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5423g00002 726 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Pral5423g00002 726 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Pral5423g00002 726 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Pral5423g00002 726 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 722 IPR045051 -
Pral5423g00002 726 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Pral5423g00002 726 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 104 IPR037045 -
Pral5423g00002 726 ProSiteProfiles Serine proteases, subtilase domain profile. 108 584 - -
Pral5423g00002 726 SUPERFAMILY Subtilisin-like 103 588 IPR036852 GO:0004252|GO:0006508
Pral5423g00002 726 ProSitePatterns Serine proteases, subtilase family, histidine active site. 194 204 IPR022398 -
Pral5423g00002 726 Gene3D - 323 462 - -
Pral5423g00002 726 Pfam Subtilase family 125 576 IPR000209 GO:0006508|GO:0008236
Pral5423g00002 726 Pfam Fibronectin type-III domain 631 722 IPR041469 -
Pral5423g00002 726 CDD PA_subtilisin_like 330 455 - -
Pral5423g00002 726 FunFam Subtilisin-like protease SBT1.5 126 333 - -
Pral5423g00002 726 Gene3D - 601 725 - -
Pral5423g00002 726 Gene3D Peptidase S8/S53 domain 126 597 IPR036852 GO:0004252|GO:0006508
Pral5423g00002 726 CDD Peptidases_S8_3 101 557 IPR034197 -
Pral5423g00002 726 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5423g00002 Pral-Chr5423 21344 25975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5423g00002 26 724 Subtilisin-like Serine Gene Family AT5G59100 47.427 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5423g00002 - - gmx:100801111 979.933