Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5414g00004 ATGGCGAAGCCGGCATCTTTGAAAGTTGTTGAAGTTTGCAGAGTGGCACCGACGCCGGAAACAACCACGTCCGACGCTGCATCGGAGACCTCCTTACCGCTCACGTTTTTCGACCTGCTGTGGGTGAGATTCCCCCCCGTCGAGCGTCTTTTCTTCTACGAATTCCCTCACCCACCTTCCTCCTTCTTCGATTCTCTTCTTCCAAAACTTAAAAACTCCCTCTCTCGCACTCTCCACCACTTTCTTCCTCTCGCCGGCAACGTCATATGGCCACCTCACTCCTCAAAGCCCTTCATCCATTACGTCTCCGGCGACGGCGTCTCTCTCACCATTGCTGAATCCGACGCCGACTTCAACCATCTTTCGGGTTCTGACTTCTCCGAAGCCGAGGAAAGCCGCCGGTTGGTACCCCACTTGGTTGTTTCTGATGAGAAAGCTGCTGTCATGAGTCTGCAAATTACTCTGTTTCCGAACTCTGGGTTCTCTGTTGGAATCGCCACCCACCACGCAACCATGGACGGAAAATCATCAACTTTGTTTATGAAATCATGGGCTTATGTCTGCTCTAATCTGGAAGAATCATCATCGCTTTCATCGATACCTGCGAATCTAAAGCCATCCTTTGACAGGTCAGTGATGATAGATCCGTCTGTAATTGCTGATAGGTTCGCGAATTTTTGGTTAAAGCAAGGCGGACCAGACAACAGAAGCTTGATATCGTGGGACTTGAATAAGACAGATCAAGGAGAGCTCATAAGGGGAACATTTGAATTGCTTCCTTCGAATATTCAGAAACTTAAGAAATCTGCAGAATCCAAGCTGAACAAGAAGGTTCATCTATCAACTTTCGCAGTAACTTGTGCCCATGTGTGGAATTGCTTGGTCAAAGCAGAGCAAACGAAACGAGAGAAAGTGTTGTTCATATTCAGTGTGGATTGTAGATCTCGTCTGGATCCTCCGATTCCATCTTCATATTTTGGCAACTGCATTGGGGCGGCTAAGGCTGAGGCTGAAACGAAGAACATGCTTGGGGATGATGGGTTCATGTTTGCTCTTGAGGCCATAATTGAAGCTTTGAAGAGATTGGAGAATGAAGCGATATTAAGTGTAGCAGAAACATGGATATCTGATATGGAAACTTTTGGACTGACCGAAACTTACAGAACGTTTTCAACTGCAGGATCTCCAAGATTTGAAGTTTATAGTAATGATTTTGGATGGGGAAGGCCCAAGAAGGTGGAGATAGTTTCTATAGACAAGACTGGAGCTTTTGCTCTTTCAGAAAGTAGGAATGGTGATGGAGGTATTGAGATTGGGTTGGTGTTGAAGAAAAGTCAAATGGAAGATTTTTCTGCTCTTTTTGTCAAAGGTCTTTCTGCCTTGTCATCATGCTCTTAA 1398 0.4578 MAKPASLKVVEVCRVAPTPETTTSDAASETSLPLTFFDLLWVRFPPVERLFFYEFPHPPSSFFDSLLPKLKNSLSRTLHHFLPLAGNVIWPPHSSKPFIHYVSGDGVSLTIAESDADFNHLSGSDFSEAEESRRLVPHLVVSDEKAAVMSLQITLFPNSGFSVGIATHHATMDGKSSTLFMKSWAYVCSNLEESSSLSSIPANLKPSFDRSVMIDPSVIADRFANFWLKQGGPDNRSLISWDLNKTDQGELIRGTFELLPSNIQKLKKSAESKLNKKVHLSTFAVTCAHVWNCLVKAEQTKREKVLFIFSVDCRSRLDPPIPSSYFGNCIGAAKAEAETKNMLGDDGFMFALEAIIEALKRLENEAILSVAETWISDMETFGLTETYRTFSTAGSPRFEVYSNDFGWGRPKKVEIVSIDKTGAFALSESRNGDGGIEIGLVLKKSQMEDFSALFVKGLSALSSCS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5414g00004 465 PANTHER - 7 460 - -
Pral5414g00004 465 Gene3D - 249 461 IPR023213 -
Pral5414g00004 465 Pfam Transferase family 25 451 - -
Pral5414g00004 465 Gene3D - 3 231 IPR023213 -
Pral5414g00004 465 SUPERFAMILY CoA-dependent acyltransferases 276 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5414g00004 Pral-Chr5414 132347 134037 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5414g00004 38 450 Monolignol Biosynthesis Gene Families AT5G48930 25.935 4.64e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5414g00004 - - gmx:100800849 509.605