Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5414g00002 ATGGCGAAAGCAGCCCCCACGAAGGTCCTTGAAGTTTGCAGGGTGGCACCACGACTCGAAGGAACCGCTTCCGCCGCCGCATCGGAAACATCTCTACCACTTACCTTTTTCGACATGCTGTGGCTGCGCTTCCCGCCCGTCGAGCGTCTTTTCTTCTACGAATTCCCCAACCCACCATCCTCCTTCTTCCATTCCCTTCTTCCAAAACTCAAACATTCACTCTCTCTCACTCTCCATCACTTCTTTCCTCTCGCCGGCAACATCATATGGCCGCCTCATTCCCCAAAACCCTTCATCCATTGTGTCTCCGGCGACGGCGTCTCACTTACCGTTGCTGAATCGAACGCAGATTTCAACGTCCTCTCAAGTTCCGATTACTCCGAAACCCAAGAAAGCATCCTGCTTGTACCCCACTTGACTGTTTCCGATGAGAAAGCCTCTCTCATGACTCTGCAAATCACTCTGTTTCCGAACTCTGGCTTCTCTGTTGGAATAACCGCGCACCATGCAGCCATGGATGGAAAATCTTCAACTTTATTTCTGAAAGCATGGGCTTATATCTGCTCTGAACTCGATGAATCCTCTTCATGTTCATCGCTACCCGAGAATCTAATTCCATTGTTTGATAGGTCAGTAGTCAAAGAGCCATCTGGGGCTGCAGAGGTATTTTCGAATCACTGGTTAAAGGAAGGTGGACCAAATAACAGAAGCTTGATGTTGTGGGACATGAAGAAGACAGATCAAGTCAAGCGAATAAGGGGTACATTTCAATTGGTTCCATCAAACATTCAAAAGCTTAAGCAGATAGCAGAGTCCAAGCTGAACAAGAAGGTTCATGTATCGACCTTTTCAGTAACATGCGCTTATGTGTTGGACTGCTTAGTCAAATCAGAACAAACAAAACAAGACAAGTTGTTGTTCGCATTCACTGCGGACTGTAGATCTCGTTTGAATTCTCCGATTCCGCCCACATATTTTGGAAGCTGCGTGGGGGCTGTTAAAGCTGTGGCTGAAACAAAGAGCTTGCTAGGGAATGATGGGTTCATTGCCGCTCTTGAGGCCATAAGTGATGGTTTGAAGAGATTTGAAGATGAAGGATTAGGTGAAGCAGAAAGATGGATATCTGATATGGTAAGTCTTATGGAAACTCATAGATTTTGTTCAACTGCAGGGTCACCAAGGTTTGAGGTCTACGGTATTGATTTTGGGTGGGGAAGACCCAAGAAGGTGGATATAGTTTCTATAGGCGAGACGGGAGCCTTTTCTCTTTCTGAAAGCAAGAATGGCAATCATAATGGAGGTATTGAGATTGGGTTGGTGTTGAACAGTCCAGAAATGGAGGCTTTTTCTGCTCTTTTTCACGAAGGTCTTTCTTCCTCTTCATGA 1386 0.461 MAKAAPTKVLEVCRVAPRLEGTASAAASETSLPLTFFDMLWLRFPPVERLFFYEFPNPPSSFFHSLLPKLKHSLSLTLHHFFPLAGNIIWPPHSPKPFIHCVSGDGVSLTVAESNADFNVLSSSDYSETQESILLVPHLTVSDEKASLMTLQITLFPNSGFSVGITAHHAAMDGKSSTLFLKAWAYICSELDESSSCSSLPENLIPLFDRSVVKEPSGAAEVFSNHWLKEGGPNNRSLMLWDMKKTDQVKRIRGTFQLVPSNIQKLKQIAESKLNKKVHVSTFSVTCAYVLDCLVKSEQTKQDKLLFAFTADCRSRLNSPIPPTYFGSCVGAVKAVAETKSLLGNDGFIAALEAISDGLKRFEDEGLGEAERWISDMVSLMETHRFCSTAGSPRFEVYGIDFGWGRPKKVDIVSIGETGAFSLSESKNGNHNGGIEIGLVLNSPEMEAFSALFHEGLSSSS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5414g00002 461 PANTHER - 7 459 - -
Pral5414g00002 461 Gene3D - 7 236 IPR023213 -
Pral5414g00002 461 Gene3D - 249 460 IPR023213 -
Pral5414g00002 461 SUPERFAMILY CoA-dependent acyltransferases 104 211 - -
Pral5414g00002 461 Pfam Transferase family 24 451 - -
Pral5414g00002 461 SUPERFAMILY CoA-dependent acyltransferases 276 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5414g00002 Pral-Chr5414 32977 34529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5414g00002 50 455 Monolignol Biosynthesis Gene Families AT5G48930 26.077 5.67e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5414g00002 - - vra:106767538 486.108