Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5413g00001 ATGGCGTCTCAAAATCCTAATAGCTCTCTGAAAATACACGAGCTCTGTAGAATAGCTCCGCCACCATCTTCACCAAAATCCTCTTTCTCTCTCACCTTCTTCGACTTGCTTTGGCTCAGATTTCATCCTGTCGAGCGTCTCTTCTTCTTCTCGGTTCCTCACTTAAACCCTTCTTCCTTCTTCGATTCCATCGTTCCAAAGCTCAAACGCTCCCTCTCTCTCACTCTGCAACACTTTCTTCCTCTCTCCGGTAGCATCGTTTGGCCCTCCGACTCGCCCAAACCCATCGTTCAATACACTCCCGGAGATGCCGTCTCTCTCACCATAGCTGTTTCTGATTCTGATTTCAACCATGTCTTAAACAAATCCCCTCGTGACGCCTCGCAATCTCGTGCTTTTGTTCCCATGTTGGATTCTTCTGATACATTTGCTTCGGCTATTTCTCTGCAAATCACTCTGTTTCACGATGGATTTTGCATAGGAATCAGCGTACACCATGCTTGTTCAGATGGGAAATCATCGTCTATGTTCATGAAGGCCTGGGCTTATCTCTGTCGAACAGAAGCAGAGAACGAATCTTCTGGTTTGCTTCGTCAAGAACTACAACCATCCTTAGACAGGGAAGTTATAGTCGATCCATGTGGCATTGAAGGTGCATACATCAAAGGGTGGTCAGGTTTAGATCCAACTCAGAAGAAGCCAAGCTTGAAGATTTTGTCCGACATGTTCTCTCCGAAAGTGGAAGACTCAGCTCGAGCCACGTTCGAGCTCAAGCGTGGAGATTTAGACAAGATAAAGGGAAGGGTATTGCAGAAATGGGAAAATCACAAGGAGAAAGATGAAGGAGAAGATTCGTCATTTTCAAAGCCTCAAACTTTATCAACCTTTGTGCTTACAGCTGCTTACGTATGGATCTGCTTCGCAAAAGCCAAGGAAAGGACCGAACAAAAGAAAACTAAAGTGTTCCTGGGTTTCGTAGTGGATTGCAGAACCAGGTTAGATCCTCCAATCTCTGAAAACTACTTCGGCAATTGTGTGATGTCTCATATGATAGAAACACAACCAGAAGACTTGACAGAAGATGGGGTTGTCATCGCTGCTAAGAAGATACACAGAAAGATAAGGAAAATACAGAAAGAGAAAGGAGCGCTTGATGGAGCAGAGACGTTGTTTTCTAAGTTTTCTGATTTGCTAACTGAAGAGAACCAACTTGCCGTTATAGGAGTAGCCGGGTCGACCCGATTCGGGGTTTATCAGGCGGACTTTGGGTGGGGAAGGCCTGAGAAAGTGGAGATAACTTCTGTGGATCGAGGTACGACAATGGCGATGGCAGAGAGTAAGGACGGAAATGGAGGGGTTGAAGTGGGACTGGTACTGAAGAATCAAGTGATGCATCAATTTGCTTCACTGTTTCGAACTGAGATAGAATCTTTACAATAA 1440 0.4514 MASQNPNSSLKIHELCRIAPPPSSPKSSFSLTFFDLLWLRFHPVERLFFFSVPHLNPSSFFDSIVPKLKRSLSLTLQHFLPLSGSIVWPSDSPKPIVQYTPGDAVSLTIAVSDSDFNHVLNKSPRDASQSRAFVPMLDSSDTFASAISLQITLFPXDGFCIGISVHHACSDGKSSSMFMKAWAYLCRTEAENESSGLLRQELQPSLDREVIVDPCGIEGAYIKGWSGLDPTQKKPSLKILSDMFSPKVEDSARATFELKRGDLDKIKGRVLQKWENHKEKDEGEDSSFSKPQTLSTFVLTAAYVWICFAKAKERTEQKKTKVFLGFVVDCRTRLDPPISENYFGNCVMSHMIETQPEDLTEDGVVIAAKKIHRKIRKIQKEKGALDGAETLFSKFSDLLTEENQLAVIGVAGSTRFGVYQADFGWGRPEKVEITSVDRGTTMAMAESKDGNGGVEVGLVLKNQVMHQFASLFRTEIESLQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5413g00001 480 Gene3D - 6 228 IPR023213 -
Pral5413g00001 480 PANTHER - 10 477 - -
Pral5413g00001 480 SUPERFAMILY CoA-dependent acyltransferases 288 477 - -
Pral5413g00001 480 Gene3D - 247 480 IPR023213 -
Pral5413g00001 480 Pfam Transferase family 16 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5413g00001 Pral-Chr5413 19574 21240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5413g00001 10 468 Monolignol Biosynthesis Gene Families AT5G48930 24.411 2.10e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5413g00001 - - pcin:129292507 603.208