Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5412g00007 ATGCCTGGAGGCTTAAGAAATCGCTCACTTTCTGCCAGATTCTCCTCCTTCACCTTAGTTCTCTCAATAAACTCTCTCCTCCTCCTCTTCTTCTCCTCATGTTGCTACTCCATCGATGACCAAGGCCAAGCTCTTCTTGCATGGAAGAACAGTTTGAACAGTACAGGAGATGTACTACTAGCATCTTGGAGTCCTTTAGATTCAAGCCCTTGCAAATGGGTTGGTGTTCACTGCAACTCCAGAGGGGATGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATTGCCTTCAAATTTTCAAGCTCTCAGGTCTTTGAAGGTTCTTGTCCTGTCAGCAACCAACCTCACAGGTTCTATCCCAGGAGAAATTGGAGACTATGGGGAGCTTGTTTCTATTGATCTCAGTGGGAATTCTCTCTCAGGTGAAATACCAGAAGATATTTGCAGGCTGAGTAAACTCGAGAGTTTGTCTCTCCATACAAACTTTCTTGAAGGTAATATTCCATCCAACATTGGGAATCTCTCGAGTCTTGTGAATTTGACGCTCTTCGACAACCAGCTCAGTGGTGAAATCCCAAAGAGTTTGGGGTCCTTAAGAAGGCTTCAAGTTTTCAGAGCAGGTGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAACCTTCCTTCTTCAATAGGGATGCTGAAGAACATCCAAACAATAGCTATTTACACAACTCTCTTGTCAGGCTCAATTCCGGAGGAGATTGGGAATTGCAGTGAGCTGCAGAATTTGTACTTGTATCAGAACTCTATTTCGGGTCCAATCCCACGTCAACTTGCAAACCTCAGAAAGCTTCAGAGTATTCTCTTATGGCAGAACAGTCTAGTGGGGACAATCCCAGAAGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGAAAACCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGATGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAACCAGTTGACAGGTACTATACCTCCAGAGATTACAAACTGCACTTCTCTGACTCAGTTGGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTGCTCTTATAGGAAAATTGAAAAGCTTGAATCTGTTCTTTGCATGGCGGAACAAGCTCACTGGGAAAATCCCAGAGAGTCTGTCTGAGTGCAAAGGTCTCGAGGCAATTGATCTGTCTTACAACAGTCTGATTGGTTCAATACCAAAATCACTCTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTATTTCCAATGAACTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCGCAAGTCTCTACAGGTTAAGGTTGAACGGAAATAAATTTTCTGGGTCCATTCCAGCTGAGATAGGAGACTTGAAGAACCTCAACTTCATGGATATGAGCAGCAATCATTTTGTGGGGCAGATTCCTTCAACATTATCTGGATGCGAGAAACTTGAGTTTATTGACCTTCATTCAAATTCTCTCACAGGTTCATTCCCAGAGGCTCTCCCCAGAAGTCTTCGATTGATAGATTTCTCAGATAATAGGCTCACTGGTTCGCTGAGTGGTACCATTGGTTCATTGAGTGAACTAACCAAACTCAATCTGGGAAGGAATCAACTCAACGGAAAAATCCCAGAAGAGATCTCATCTTGTTCTAAGCTTCAACTTCTAGACCTGGGAAGCAATGAATTTTCTGGAGAAATTCCAAAGCAATTGGGTCAAATCCCATCATTGGAAATCTCTTTAAATCTTAGCTTCAATCAATTTTCTGGCCAAATCCCATCCCAAATCTCCGCTCTCACCAAACTGGGTGTACTTGATATCTCCCACAACAACCTCTCAGGGAACCTAAACTCTCTCTCTGACCTTCAAAATCTTGTTTCGTTAAACGTCTCCTTCAACGACTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAACCTGCCTTTAAGCGACCTCACCCCAAATAAAGGCCTCTACATATCCGGCGCCGACGGTTTGACTCCGGTCGACGGAGTGGGACCCAGTAAAGTCCATGCCAGATCAGCAATGAAGTTCATCATGTCCATTCTCTTAAGCATAAGTGCAGTACTTGTACTGCTCACAATCTATGCATTGGTACGTTCTCATATTCAAAACAGGGCAATCATGGAAGATAGCTCATGGGAGCTGACTTTTTATCAGAAGCTCGAAATCTCCTCCATTGATGATGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACAGGAAGCTCCGGGGTGGTGTACCGGGTAACAATCCCCAACAGCTCCATCGGCGAGCTGGCCGAAAAAATGTGGTCTTCAGAAGAATCCGGAGCGTTCGATTCCGAGATTCGAACTCTGGGTTCAATCCGACACAAGAACATCGTGAGACTCCTGGGTTGGGGATCCAACAAGAACATCAAGCTCCTGTTCTACGACTACCTCCCCAACGGCAGCCTCAGCTCGATGCTTCATGGTTCCGGAAAAGGAAGTGCAGATTGGGAAACCAGGTACGAGGTTGTGGTGGGTGTGGCTCACGCGCTAGCTTATTTACACCACGATTGCGTCCCTCCAATACTCCACGGCGACGTCAAGGCCATGAACGTCTTACTGGGCAACAGGTTTCAGGCTTATCTCGCAGATTTCGGCTTAGCGAGAATCGTTAATGAAAAAGACGACCCTCATCATCATCATTCTGATCCTAAACCACTTCATAAAACATATCTGGCTGGTTCTTACGGATACATGGCCCCAGAACATGCA 2871 0.4518 MPGGLRNRSLSARFSSFTLVLSINSLLLLFFSSCCYSIDDQGQALLAWKNSLNSTGDVLLASWSPLDSSPCKWVGVHCNSRGDVEEISLKSVDLKGSLPSNFQALRSLKVLVLSATNLTGSIPGEIGDYGELVSIDLSGNSLSGEIPEDICRLSKLESLSLHTNFLEGNIPSNIGNLSSLVNLTLFDNQLSGEIPKSLGSLRRLQVFRAGGNKNLKGELPWEIGNCTSLVMLGLAETSISGNLPSSIGMLKNIQTIAIYTTLLSGSIPEEIGNCSELQNLYLYQNSISGPIPRQLANLRKLQSILLWQNSLVGTIPEELGSCTELKVIDFSENLLTGSIPRSFGMLSNIEEIQLSVNQLTGTIPPEITNCTSLTQLEVDNNALSGEIPALIGKLKSLNLFFAWRNKLTGKIPESLSECKGLEAIDLSYNSLIGSIPKSLFGLRNLTKLLLISNELSGFVPPDIGNCASLYRLRLNGNKFSGSIPAEIGDLKNLNFMDMSSNHFVGQIPSTLSGCEKLEFIDLHSNSLTGSFPEALPRSLRLIDFSDNRLTGSLSGTIGSLSELTKLNLGRNQLNGKIPEEISSCSKLQLLDLGSNEFSGEIPKQLGQIPSLEISLNLSFNQFSGQIPSQISALTKLGVLDISHNNLSGNLNSLSDLQNLVSLNVSFNDFSGELPDTPFFKNLPLSDLTPNKGLYISGADGLTPVDGVGPSKVHARSAMKFIMSILLSISAVLVLLTIYALVRSHIQNRAIMEDSSWELTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPNSSIGELAVXKMWSSEESGAFDSEIRTLGSIRHKNIVRLLGWGSNKNIKLLFYDYLPNGSLSSMLHGSGKGSADWETRYEVVVGVAHALAYLHHDCVPPILHGDVKAMNVLLGNRFQAYLADFGLARIVNEKDDPHHHHSDPKPLHKTYLAGSYGYMAPEHA 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5412g00007 958 FunFam Leucine-rich receptor-like protein kinase family protein 341 613 - -
Pral5412g00007 958 Gene3D Phosphorylase Kinase; domain 1 738 851 - -
Pral5412g00007 958 Gene3D Transferase(Phosphotransferase) domain 1 852 958 - -
Pral5412g00007 958 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 213 338 - -
Pral5412g00007 958 ProSiteProfiles Protein kinase domain profile. 776 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5412g00007 958 Pfam Leucine rich repeat 299 359 IPR001611 GO:0005515
Pral5412g00007 958 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Pral5412g00007 958 Gene3D Ribonuclease Inhibitor 276 534 IPR032675 -
Pral5412g00007 958 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Pral5412g00007 958 Gene3D Ribonuclease Inhibitor 38 197 IPR032675 -
Pral5412g00007 958 Gene3D Ribonuclease Inhibitor 614 698 IPR032675 -
Pral5412g00007 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Pral5412g00007 958 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Pral5412g00007 958 Gene3D Ribonuclease Inhibitor 535 613 IPR032675 -
Pral5412g00007 958 SMART LRR_typ_2 442 466 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 490 514 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 105 129 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 298 322 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 633 656 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 560 584 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 153 177 IPR003591 -
Pral5412g00007 958 SMART LRR_typ_2 346 370 IPR003591 -
Pral5412g00007 958 SUPERFAMILY RNI-like 86 397 - -
Pral5412g00007 958 SMART serkin_6 776 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5412g00007 958 SUPERFAMILY RNI-like 291 666 - -
Pral5412g00007 958 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 699 - -
Pral5412g00007 958 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Pral5412g00007 958 Pfam Protein kinase domain 779 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5412g00007 958 SUPERFAMILY Protein kinase-like (PK-like) 759 957 IPR011009 -
Pral5412g00007 958 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 501 957 - -
Pral5412g00007 958 FunFam Leucine-rich receptor-like protein kinase family protein 38 200 - -
Pral5412g00007 958 Gene3D Ribonuclease Inhibitor 203 275 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5412g00007 Pral-Chr5412 41845 45033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5412g00007 35 958 Receptor kinase-like Gene Family AT5G56040 66.235 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5412g00007 Pkinase 7.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5412g00007 - - gmx:100802880 1393.64