Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5412g00001 ATGGCTACAATGGTAGGGGCTGATCTGCCTCAAAAGAGGTACATTGAATGGCAAGATTTTGTTGTCACACAAACTGACTTAAGTATGAGTAGAGTAATCGTGGTCGATCAGGGTGGAGCCGGAGATTCAACGACCATCCAAGGCGCTCTTGATCTCATTCCCGATAGTTACCAAGCTAGAATCAAAATCATCATCCATCCCGGAATTTACAATGAGATAATAACTGTACCACAAAGCAAGTCACATATATCATTCATAGGAATACCAGGAGCAACAGATGGTTACTATCCTTTGATCACTAGTTCTCGTAAGGCATCTGATAAAGATGCTAATGGCAACGAAATTGGAAGTGTTAATACTGCAACTCTTACGGTTGAAGCTGATTATTTTGTTGCCACTGCTATTACTATTCAGAATAATGCGGTTCCAACGGGATATGCAGATCAAGCAGTAGCAGTGAAAATAGATGGTGATAAAGCCATGTTCTATAGGGTGACCTTCTTAGGAAATCAGGACACACTTTTGGATAACCATGGAACTCATTTCTTTTATCACTGTTATATTCAAGGAACTGTTGATTTCATCTGGGGCTCTGCTACCTCATTATATGAGGGATGTACAATAAACTCAGTGAGATCAGGATCAATAGTAGCTCATGGAAGGAAGGAAGAAGATAATAGCGGGTTCATCTTTGAAGGGTGCAAAATTGAAGGCAATGGACCCACTCTTCTTGGAAGGACTTTGGGGTCACATGCCAGAATAATATTCTCTTTTTGCACTATAGACAATATTATTACTCCTCAAGGTTGGTCCAACATGGATGGTATACCCATACGAAGCACTGCTATGCTGGGAGAATATATGAATGAGGGACCTGGAGCAAATAGGGCAGGAAGGCATCCTGCATCTCAAGCTTTATCTAATGCTCAAGTAATGAGATTTGTGGGAAGAAGTTTTATTGATGGATCTAATTGGCTTCGAATATAA 987 0.4053 MATMVGADLPQKRYIEWQDFVVTQTDLSMSRVIVVDQGGAGDSTTIQGALDLIPDSYQARIKIIIHPGIYNEIITVPQSKSHISFIGIPGATDGYYPLITSSRKASDKDANGNEIGSVNTATLTVEADYFVATAITIQNNAVPTGYADQAVAVKIDGDKAMFYRVTFLGNQDTLLDNHGTHFFYHCYIQGTVDFIWGSATSLYEGCTINSVRSGSIVAHGRKEEDNSGFIFEGCKIEGNGPTLLGRTLGSHARIIFSFCTIDNIITPQGWSNMDGIPIRSTAMLGEYMNEGPGANRAGRHPASQALSNAQVMRFVGRSFIDGSNWLRI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5412g00001 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 327 - -
Pral5412g00001 328 Pfam Pectinesterase 33 322 IPR000070 GO:0030599|GO:0042545
Pral5412g00001 328 SUPERFAMILY Pectin lyase-like 29 327 IPR011050 -
Pral5412g00001 328 Gene3D - 31 328 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5412g00001 Pral-Chr5412 3751 5329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5412g00001 2 272 Carbohydrate Esterase AT5G55590 45.364 1.77e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5412g00001 K01051 - csin:114312407 306.99