Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5411g00057 ATGAAAGGAGAGATTTTGCGTAAAGGGCCGTGGCTGCAAGAGGAAGACGAGCAACTAACCACCTTTGTTACTTGTCTGGGAGAACGAAGATGGGATTCCCTTGCCAAAGTAGCTGGACTGAGGAGAAGTGGTAAGAGTTGCAGGTTGAGGTGGATGAACTATCTTCGTCCAAATCTGAAGCATGGCCCTTTTAGTGTTGAAGAAGAGCAAGTCATTATTCAACTTCACCAGCAATGGGGTAACAAATGGTCAAAGATTGCGCGCAGTCTACCTGGAAGAACTGACAATGAAGTCAAGAATTACTGGAGAACTCATTTAAGGAAGAAAGCACGAGTAGTTAAACAAGGAGATGAGTTCCCATGTAAACCAGACAACACTGAACAAGGTGCCTTCAGTGAGGAAAACATGAATGATAAGGCTGGCAAGGATTACGACCAAATCAACCTTGGATGCCCAGAAAATGTTGAGGAGACTAAGGATAATTCCTTTCAAGCCTGTCCACCATCAGAATGGGAAATCACGAGTTCCCCATACGAGATACGAATATCAGATTGGATAGCAGAACTGCAAAAAGATCAGAATGAAATAGAATATTATGAATATCATTGTAATTATAGCTTCCAGTCCGCTGAATCTTATTCTACATGGTTTGACTCTGATACGTGGGCTTGTTCTTATTCAGGTTCCATCTGGGACATGAATTGA 705 0.4241 MKGEILRKGPWLQEEDEQLTTFVTCLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPNLKHGPFSVEEEQVIIQLHQQWGNKWSKIARSLPGRTDNEVKNYWRTHLRKKARVVKQGDEFPCKPDNTEQGAFSEENMNDKAGKDYDQINLGCPENVEETKDNSFQACPPSEWEITSSPYEIRISDWIAELQKDQNEIEYYEYHCNYSFQSAESYSTWFDSDTWACSYSGSIWDMN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5411g00057 234 Gene3D - 62 139 - -
Pral5411g00057 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Pral5411g00057 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Pral5411g00057 234 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Pral5411g00057 234 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Pral5411g00057 234 Gene3D - 8 60 - -
Pral5411g00057 234 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Pral5411g00057 234 CDD SANT 63 106 IPR001005 -
Pral5411g00057 234 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 6 166 - -
Pral5411g00057 234 FunFam Myb transcription factor 8 60 - -
Pral5411g00057 234 CDD SANT 10 55 IPR001005 -
Pral5411g00057 234 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Pral5411g00057 234 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
Pral5411g00057 234 SMART sant 7 57 IPR001005 -
Pral5411g00057 234 SMART sant 60 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5411g00057 Pral-Chr5411 282942 284519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5411g00057 7 115 MYB Transcription Factor Family AT5G59780 63.303 6.30e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5411g00057 Myb_DNA-binding 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5411g00057 K09422 - gmx:100783472 267.7