Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5411g00029 ATGAGCTCCGAAGTGGTCCTCCACAGATTCTCCCAATCCGACCCTAAACCTAACACGGGGCCACCCGCCGCCGCAGATTCCGACTCCAATGTGCAGCTCTCCCACCCTCGAAAATCCACTGCCATATCTTCCTCTCGCTCCACCAAAGACCGTCACACCAAGGTCAACGGTCGGGGCCGCCGTGTCCGTATGCCGCCTCTCTGCGCCGCCCGAATATTTCAACTGACCCGAGAACTAGGACACCGTTCAGACGGCGAGACAATAGAGTGGCTGCTACGCCAGGCCGAGCCATCTATCATTGCCGCCACCGGCACCGGAACGGTTCCTGCAGAACCCGTATCCACCAGCAACGCTGCGATATCGTCATCGGCAGCCTCTGTTCCTTGTCGAGTCCATCCTGTTTCCGCGGTTACTAGTGGGCAGGGGATGTTTGCAATGTCTTTGCCACCGCCGCAGCAGCAGCATCAGCCGCAGCCGAGCTGCAGATTAGACTTGTGTCAGCCAATTGGGATGGAGTATGCTGCAGCGGCCGCAGCCAATGGATACAGGAATATGCCGTTCACGGCTTTGTTGTTACAACCCTCAACGGAGGAAACAGAGGAAACGCAGCAAGATGAGACTCTCAGAGAGTAA 633 0.5735 MSSEVVLHRFSQSDPKPNTGPPAAADSDSNVQLSHPRKSTAISSSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAEPVSTSNAAISSSAASVPCRVHPVSAVTSGQGMFAMSLPPPQQQHQPQPSCRLDLCQPIGMEYAAAAAANGYRNMPFTALLLQPSTEETEETQQDETLRE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5411g00029 210 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 138 IPR005333 GO:0003700
Pral5411g00029 210 MobiDBLite consensus disorder prediction 1 60 - -
Pral5411g00029 210 Pfam TCP family transcription factor 47 152 IPR017887 -
Pral5411g00029 210 MobiDBLite consensus disorder prediction 1 43 - -
Pral5411g00029 210 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5411g00029 Pral-Chr5411 134814 135842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5411g00029 48 196 TCP Transcription Factor Family AT2G37000 56.667 1.11e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral5411g00029 TCP 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5411g00029 - - qsa:O6P43_006644 252.292