Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5411g00023 ATGAAGTGTTTTCCATTCCACTACAGAGAGAAGAAGGAAGAACCGATGAGCATGAAGTCAACTTCGGGTCGGTCCAACAGTTCCACAAATGCTGAGGATGATATGAGAAGATCTGGTTCTGAATTGAATTCTAAGGATCCTTCAGAAAACAGTGCAGAGTTCCTCAGGAGGACTGCATTACCCAGTTTGTCTCAAAGACCCAGCAATCTGAAAGTTTTCACTGTTCCTGAACTAAAATCAGCCACAAAGAATTTCAGTCGCTCTGTTATGCTTGGAGAGGGAGGGTTTGGGTGTGTATACAAGGGATTCATCAAGACAGGAGAGGATTCTAACAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGGCATAAGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCGAATCTGGTAAAACTAGTGGGTTACTGTGCGGATGATGATGAAAGAGGAATCCAGCGTCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCACTTATCACCCCGTTCTGAGAATCCTCTCTCATGGAGTAGAAGATTGAAAATTGCTGAAGATGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTTAGGGACTTCAAATCTTCAAACATCCTCCTGGATGAGCATTGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCACGTCTCAACAGCGGTTGTGGGAACAATGGGTTATGCGGCTCCTGAATATGTTCAAACTGGCCGTCTGACATCCAAGAGTGATGTATGGAGCTATGGCGTCTTCCTTTATGAACTCATCACTGGCCGGCGCCCTTTTGATCGAAATCGTCCAAAGGGTGAGCAGAAACTCTTGGAATGGGTGAGGCCATACTTATCAGATGGGAAGAAATTTCAACTAATATTGGATCCAATGCTCGAAAGGAAACACGTTTTCAAGTCAGCGCAAAGACTTGCTATTGTAGCTAACCGATGTTTAGTCAAAAACCCAAAGAGTCGTCCTAAGATGAGCGAGGTATTGGATATGGTGAATCAGATTGCGCAATCTTCATTGAGTGCAAGTCCAGAACTACCCCTGAAGAATTTCGCATCAGCGCGAACGTTGCAAGAAACCAAATTAAAGAACAAGAGAAGGATTATGGACCAGAAAACTGGAGAAACTAATTGGTTTTTTAGGATGTGGAGGCCAAAACATCAAAGAGCTAGTTGA 1278 0.4335 MKCFPFHYREKKEEPMSMKSTSGRSNSSTNAEDDMRRSGSELNSKDPSENSAEFLRRTALPSLSQRPSNLKVFTVPELKSATKNFSRSVMLGEGGFGCVYKGFIKTGEDSNRKIEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLSWSRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPMLERKHVFKSAQRLAIVANRCLVKNPKSRPKMSEVLDMVNQIAQSSLSASPELPLKNFASARTLQETKLKNKRRIMDQKTGETNWFFRMWRPKHQRAS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5411g00023 425 Gene3D Transferase(Phosphotransferase) domain 1 171 381 - -
Pral5411g00023 425 SUPERFAMILY Protein kinase-like (PK-like) 61 366 IPR011009 -
Pral5411g00023 425 MobiDBLite consensus disorder prediction 1 53 - -
Pral5411g00023 425 MobiDBLite consensus disorder prediction 1 18 - -
Pral5411g00023 425 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Pral5411g00023 425 PANTHER OS01G0588500 PROTEIN-RELATED 33 370 - -
Pral5411g00023 425 FunFam Serine/threonine-protein kinase BIK1 54 170 - -
Pral5411g00023 425 ProSiteProfiles Protein kinase domain profile. 85 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5411g00023 425 CDD STKc_IRAK 91 369 - -
Pral5411g00023 425 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Pral5411g00023 425 Gene3D Phosphorylase Kinase; domain 1 59 170 - -
Pral5411g00023 425 Pfam Protein kinase domain 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5411g00023 Pral-Chr5411 120383 124694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5411g00023 1 363 Glycoside Hydrolase AT3G07070 43.583 1.16e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5411g00023 Pkinase 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5411g00023 - - qsa:O6P43_010275 691.419