Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5411g00022 ATGGATCCAGAAGAATACTTGCTGAAGTGTTCCAATATGAAATGCCAAAGGGTTCAAGTGGATGGATCATTTGTTCCTGCTATTCAAGATGAATCAACGGAAGTTGAACATTTGCTTGCAGAACCTAGAAATGATCATGTTTCAGTGGATGGTATTTTGTATTTTCATGAGGAGAATGCAGGCAAATGCTGTGCTGCTGTTGATGATCTTTCCCGTGGATTTGAGTTTGGTCTAAGTACAAGCATAGGGGGATCAGATTCTCACACAACTTTGAATGGAAAAGATGATTTGAAACTTGAGGTACTTGATGGGTTGCTGGATGATGTTGAAATTGATGCTCTTAATGCGACAGATGGGTTTTCGTGTGAAGATTATCTTTTGGATTTTGAATTTGCTGACAAAGCTGTGGGTCTTTGTGGGGAATCACTAGTGCAAAGTTCAAGCTCTGAGAGTCATTCTCCAGGATTAAGTGGAAGTAGCAATGGTGTTGGTGGGGTACCTGAATCATCAAAAGTGGCCATTGAACAATCTGAGTACAAAAATGTTTTTCTAGATAGTAGAGTAACCCATGACTTACGTGGTGCCTCCAGGAACAGTGCCTGTCAAACGTCAATTGAAGATGGAATTTGCAATTCACTTGATATGCAGCATCTAAATGAGTTGGATAATGACCCCCCCTTATCAAATAGTGTATTGTCTCGTAAGAAGGATAAGGTTTCTGCAGATGAATGTCAAACTGCTGCAGTTAGAGAGAAGAGATGCCGTAAGCCTACTCTGAGGTATATCGAAGAATTTTCAAATTTAAGTTCAAAAGAAAAGGTCTTGAATTCTGCAACCAATAATAAGCCCTTGAGTTTGGTATCACATCACAAGCTTCGTCGTATAAGGTTTAGAGCATTGAGACACATTCCAGGCAAGAATTCTGATAGTCAAACGAGTGATATGGCGCTTCCTGAGTTGCAGGTTCACAAGCGATGTCTGCAAAATGAGGAACTTGAGTATGATGAGGAGTCTATTGCATCTGAGTCCGAGGATGAATGCGTGACACCAAAAAGATATAGGAAAAATGATCGGAGGAAGCATCAAAGAATGTGGACTTTATCTGAAGTGATCAAGTTGGTTGATGGCATTTCTGAATATGGAGTTGGACGATGGACCGACATAAAGCGTGTTCTGTTTTCATCCTCCAGTTACCGTACACCAATAGATCTTAGGGACAAGTGGCGGAATCTGTTAAGAGCCAGTTCAGCACATAAATTTAACAGCAAAGAGACTGAACAAAAGCAGCAGCACGCCTTGCGTTCCTTACCAAGTTCTGTACTTCGCCGTGTCTATGAACTGGCTAAGATTCACCCGTATCCGAGGGAGCGTAATCCGAACGAATCATCTGCGGGCCAACTTAGCTCCTCTATCCTTCCAACTCGGACGAAAGACAGTCCTAGCAAAAGAAATGTACGTAGGAAGAAGTGTACTTAA 1476 0.4167 MDPEEYLLKCSNMKCQRVQVDGSFVPAIQDESTEVEHLLAEPRNDHVSVDGILYFHEENAGKCCAAVDDLSRGFEFGLSTSIGGSDSHTTLNGKDDLKLEVLDGLLDDVEIDALNATDGFSCEDYLLDFEFADKAVGLCGESLVQSSSSESHSPGLSGSSNGVGGVPESSKVAIEQSEYKNVFLDSRVTHDLRGASRNSACQTSIEDGICNSLDMQHLNELDNDPPLSNSVLSRKKDKVSADECQTAAVREKRCRKPTLRYIEEFSNLSSKEKVLNSATNNKPLSLVSHHKLRRIRFRALRHIPGKNSDSQTSDMALPELQVHKRCLQNEELEYDEESIASESEDECVTPKRYRKNDRRKHQRMWTLSEVIKLVDGISEYGVGRWTDIKRVLFSSSSYRTPIDLRDKWRNLLRASSAHKFNSKETEQKQQHALRSLPSSVLRRVYELAKIHPYPRERNPNESSAGQLSSSILPTRTKDSPSKRNVRRKKCT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5411g00022 491 SMART sant 361 414 IPR001005 -
Pral5411g00022 491 Pfam Myb-like DNA-binding domain 365 412 IPR001005 -
Pral5411g00022 491 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 10 478 - -
Pral5411g00022 491 CDD SANT_TRF 363 413 - -
Pral5411g00022 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 357 416 IPR017930 -
Pral5411g00022 491 MobiDBLite consensus disorder prediction 459 478 - -
Pral5411g00022 491 MobiDBLite consensus disorder prediction 147 166 - -
Pral5411g00022 491 MobiDBLite consensus disorder prediction 451 491 - -
Pral5411g00022 491 SUPERFAMILY Homeodomain-like 359 442 IPR009057 -
Pral5411g00022 491 ProSiteProfiles Myb-like domain profile. 357 412 IPR001005 -
Pral5411g00022 491 Gene3D - 351 462 - -
Pral5411g00022 491 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5411g00022 Pral-Chr5411 108627 113045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5411g00022 363 412 Single Myb Histone (SMH) Gene Family AT1G15720 46.000 6.82e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5411g00022 - - aprc:113871152 478.018