Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5411g00018 ATGAAGAAAGAGTTTCTGAGAGGGTGCCTTCATAAGTGGAAGGAAATGAAGAGTCGAGTCATACCCTGTAGTGCCTGTGAGTGTTGTCGTAAATGGGCTTTAGGGTCGTCCATGCGTGAAAGAAGATCAATCCCAAGTGATGTCCCGAAGGGTCACCTTGTTGTCTATGTAGGGGAGAATTTCAAGAGATTTGTAATCAAGGTCACTTTACTAAACCATCCACTCTTCAAGGCATTGCTGGATCAAGCTCGGGAGGAATACGATTTTGTTTCTTATTCAAAACTTTGCATCCCTTGCGACGAGCATCTTTTCCTCAGTGTCCTTCGCTGTGCTAGCTCTCTGAACAAGATGAAAGGAGCGAGTCTCTGTGTTTGA 375 0.448 MKKEFLRGCLHKWKEMKSRVIPCSACECCRKWALGSSMRERRSIPSDVPKGHLVVYVGENFKRFVIKVTLLNHPLFKALLDQAREEYDFVSYSKLCIPCDEHLFLSVLRCASSLNKMKGASLCV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5411g00018 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 107 IPR003676 GO:0009733
Pral5411g00018 124 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5411g00018 Pral-Chr5411 103653 104167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5411g00018 46 119 Calmodulin-binding Proteins AT4G34750 48.718 5.79e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5411g00018 K14488 - vvi:100253355 179.489