Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5411g00011 ATGGAGTCCGTCGCCCAGGCTAACGGTCACCACCAGAATGGTTCCTTCTGCTTGAGTAATGGCAAGGCTGATCCCCTGAACTGGGGGGTCGCCGCCGAGTCCCTCAAGGGCAGCCACTTGGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAAGCCGGTGGTCAGGCTTGGCGGCGAGACTCTCACCATCTCTCAGGTGGCTGCCATTGCCTCACATGACCAGGGAGTGAAGGTGGAGCTGTCGGAGTCTGCCAGGGCCGGCGTCAAGGCCAGCAGCGACTGGGTCATGGACAGCATGAACAAGGGAACCGATAGTTACGGTGTAACCACCGGATTCGGGGCCACCTCTCACAGAAGAACAAAGCAAGGCGCTGCTTTGCAGAAAGAGCTCATCAGATTTTTGAACGCCGGAATATTCGGCAATGGTACAGAGACTTGCCAAACTCTGCCACACTCCGCCACAAGAGCAGCCATGCTAGTCAGAATCAACACTCTTCTCCAAGGATACTCTGGCATCCGATTTGAAATCCTAGAAGCCATCACCAAGTTCCTCAACCACAACATCACCCCATGCTTGCCACTTCGTGGTACCATCACAGCCTCCGGCGATCTCGTCCCTCTTTCTTACATCGCCGGTTTACTCACCGGCAGACCTAACTCCAAGGCCGTTGGACCCAGCGGTGAAGCCCTTAATCCCAAGGAAGCTTTCCAATTGGCAGGCATCGAGTCCGAGTTCTTCGAGTTGCAGCCCAAGGAAGGGCTCGCTCTTGTAAATGGCACCGCCGTTGGTTCTGGCTTGGCTTCTATGGTTCTGTTCGAGGCTAACGTTCTAGCCGTGCTCGCTGAAGTTCTTTCGGCTATTTTCGCTGAAGTCATGCAAGGGAAGCCTGAATTTACAGACCATTTGACCCATAAATTGAAGCACCATCCTGGCCAGATTGAGGCCGCTGCTATCATGGAACACATTTTGGATGGAAGCTCCTATGTTAAAGCAGCCAAGAAGTTGCACGAGATGGATCCTCTGCAGAAGCCTAAACAAGATCGCTATGCCCTTCGAACTTCACCACAGTGGCTTGGCCCTCTCGTTGAAGTTATCAGATTCTCCACCAAGTCAATTGAGAGAGAGATCAACTCTGTGAACGATAACCCCTTGATCGACGTTTCAAGGAACAAGGCTCTACATGGTGGTAACTTCCAGGGGACCCCAATTGGAGTCTCCATGGACAACACGCGTCTGGCTATCGCTTCCATCGGAAAGCTCATGTTTGCTCAATTCTCTGAGCTCGTCAACGACTTCTACAACAATGGCTTGCCTTCCAATCTGACTGCCAGTAGAAACCCCAGCTTGGATTATGGTTTCAAGGGGGCTGAAATCGCCATGGCTTCTTACTGCTCTGAACTTCAGTATCTTGCCAATCCCGTAACAAGCCACGTCCAAAGTGCCGAGCAACACAACCAAGATGTGAACTCTTTGGGCTTGATCTCGTCTAGGAAAACAAACGAAGCCATTGAGATCTTAAAGCTCATGTCTTCCACATTTTTAGTCGCCCTCTGCCAAGCAATTGACTTGAGGCACTTGGAAGAGAACTTGAAGAACACAGTGAAGAACACAGTTAGCCAAGTTGCCAAGAGAACTCTGACCACTGGTGTGAACGGAGAACTCCATCCTTCAAGATTCTGCGAGAAGGATTTACTGAAAGTTGTAGACAGGGAGCACGTGTTTGCCTACGCTGATGATCCCTGCAGTGCTATTTACCCATTGATGCAGAAACTCAGGCAAGTTCTGGTGGACCATGCTCTGGCCAATGCCGAAAACGAGAAGAACACGAGCACATCAATCTTCCAAAAGATTGGAACTTTCGAGGAGGAGTTGAAGAATGTATTGCCGAAGGAAGTTGAGGGTGCAAGAGTCGCATACGAGACCGGCAATTCTGAAATTCCAAACAGGATCAAGGAATGCAGGTCATACCCTCTGTACAAGTTTGTGAGAGAGGAGCTGGGGACTCAGTTGCTAACCGGCGAGAGGGTGATTTCACCAGGTGAGGAATGCGACAAGGTGTTCACAGCTTTATGTCAGGGCAAGATCATTGATCCTCTTCTGGAATGCGTTGGCCAGTGGAATGGCGCCCCTCTTCCAATCTGTTAA 2148 0.5107 MESVAQANGHHQNGSFCLSNGKADPLNWGVAAESLKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIASHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTETCQTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEALNPKEAFQLAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANVLAVLAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYADDPCSAIYPLMQKLRQVLVDHALANAENEKNTSTSIFQKIGTFEEELKNVLPKEVEGARVAYETGNSEIPNRIKECRSYPLYKFVREELGTQLLTGERVISPGEECDKVFTALCQGKIIDPLLECVGQWNGAPLPIC 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5411g00011 715 FunFam Phenylalanine ammonia-lyase 528 649 - -
Pral5411g00011 715 NCBIfam phenylalanine ammonia-lyase 24 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pral5411g00011 715 SUPERFAMILY L-aspartase-like 24 715 IPR008948 GO:0003824
Pral5411g00011 715 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Pral5411g00011 715 PANTHER HISTIDINE AMMONIA-LYASE 14 715 IPR001106 -
Pral5411g00011 715 CDD PAL-HAL 60 525 IPR001106 -
Pral5411g00011 715 FunFam Phenylalanine ammonia-lyase 17 261 - -
Pral5411g00011 715 Pfam Aromatic amino acid lyase 62 538 IPR001106 -
Pral5411g00011 715 FunFam Phenylalanine ammonia-lyase 262 568 - -
Pral5411g00011 715 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Pral5411g00011 715 Gene3D - 528 649 IPR023144 -
Pral5411g00011 715 Gene3D - 17 261 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5411g00011 Pral-Chr5411 84458 88149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5411g00011 24 715 Monolignol Biosynthesis Gene Families AT2G37040 86.272 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5411g00011 K10775 - gmx:100811101 1281.54