Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5410g00008 ATGCTAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCAGAGCATGAAGCACGGCAGATTGTGAATGCAGCTAAGAATGAAAAATTGGCTAGGCTGAAGCAGGCCAAGGAAGAGGCGGAAAAGGAGATTTCTGAATATCGAGGTCAGGTGGAGTACGAGTTCCAAAAGAAATTGGCAGAGAGTAGTGGAGATTCTGGTGCCAATGTGAAGCGGCTTGAGCAAGAGACTGAATCAAAGATCAGTCACCTCAAGACAGAGGCTGAGAGAATATCTCAGGATGTTGTTTCTATGCTCCTCAAGCATGTAACTACCGTGAGAAATTAA 339 0.4572 MLMASNRGQGGIQQLLAAEHEARQIVNAAKNEKLARLKQAKEEAEKEISEYRGQVEYEFQKKLAESSGDSGANVKRLEQETESKISHLKTEAERISQDVVSMLLKHVTTVRN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5410g00008 112 Gene3D - 3 112 - -
Pral5410g00008 112 Pfam Vacuolar (H+)-ATPase G subunit 9 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5410g00008 112 Coils Coil 78 98 - -
Pral5410g00008 112 NCBIfam V-type ATPase subunit G 5 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5410g00008 112 Coils Coil 12 54 - -
Pral5410g00008 112 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 3 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5410g00008 112 FunFam V-type proton ATPase subunit G 5 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5410g00008 Pral-Chr5410 20348 22374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5410g00008 3 112 Primary Pumps ATPases(2) AT3G01390 75.455 8.00e-47 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5410g00008 K02152 - gmx:100305477 187.578