Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5410g00005 ATGGCTGTTCATTTTTTGGTGATACTTAATGGTTATTCTTCTGGCAGTTTTCTTTCAAGCATAGGTAACAATTACTTCCATCACAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCAGAGCATGAAGCACGGCAGATTGTGAATGCAGCTAAGAATGAAAAATTGGCTAGGCTGAAGCAGGCCAAGGAAGAGGCGGAAAAGGAGATTTCTGAATATCGAGGTCAGGTGGAGTACGAGTTCCAAAAGAAATTGGCAGAGAGTAGTGGAGATTCTGGTGCCAATGTGAAGCGGCTTGAGCAAGAGACTGAATCAAAGATCAGTCACCTCAAGACAGAGGCTGAGAGAATATCTCAGGATGTTGTTTCTATGCTCCTCAAGCATGTAACTACCGTGAGAAATTAA 420 0.4357 MAVHFLVILNGYSSGSFLSSIGNNYFHHRMASNRGQGGIQQLLAAEHEARQIVNAAKNEKLARLKQAKEEAEKEISEYRGQVEYEFQKKLAESSGDSGANVKRLEQETESKISHLKTEAERISQDVVSMLLKHVTTVRN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5410g00005 139 Coils Coil 105 125 - -
Pral5410g00005 139 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 30 139 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5410g00005 139 NCBIfam V-type ATPase subunit G 35 138 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5410g00005 139 FunFam V-type proton ATPase subunit G 32 139 - -
Pral5410g00005 139 Coils Coil 39 81 - -
Pral5410g00005 139 Gene3D - 29 139 - -
Pral5410g00005 139 Pfam Vacuolar (H+)-ATPase G subunit 36 137 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5410g00005 Pral-Chr5410 20348 23187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5410g00005 30 139 Primary Pumps ATPases(2) AT3G01390 75.455 2.23e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5410g00005 K02152 - gmx:100305477 187.578