Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00067 ATGGAGAGGGATCCCCATAACTTGGAAATTCAACTCCCTCCTGGTTTTAGATTCCACCCTTCCGACGAGGAGCTCGTTGTTCACTACCTTAGAAACAAAGTGACTTCACGTCCCCTCCCTGCTTCATTCATTGCAGACGTAGATCTCTATAAGTTCAACCCATGGGAGCTTCCAAGCAAGGCTCTATTTGGAGAGGATGAGTGGTTTTTCTTTACTCCGAGGGACAGAAAGTATCCGAATGGATTGAGGCCTAATAGAGCAGCCGGGTCAGGTTATTGGAAGGCTACGGGGACTGATAAACCTATTCTTACTTCGTGTGGAATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGACGTCCCCCTAAAGGATCTAAAACCGATTGGATCATGCATGAGTATAGGTTGCTTGATTCAATGATCTTCAGTTACAAGCAAAGAGGGTCTATGAGACTGGATGATTGGGTGTTGTGCAGGGTTCGTCGAAAAATCAGCAGCCCAAGAAACACCTGGGAAGAGTCGAATGAACCTAGTTACGAGCCTGCAAGCTATTTTAAGAATTATGAGAGTCCTGATCCTGAGGAAACTGACAAAACCCTTGTGTTCAATGAATTTCCCATGTTGCCATACATTCTAGCATCCGAGACGAATACTCTTCCTTCCACGGGAAATGCATCATCAAGCTTAAGCAATCAGCGTTATGGTAATGCTTTTGTCTATGAAGACACCTCAAACGTAGAAGAACAGTTCTCAGAATCTGCTGTTGAGAGCTTGAAGAGAAAACTCTATGAACAAAACCAAATGGACCTTTATGATTCTCCTCCCTTTAAGAAGCCATTAAGAGAGGAAGATAATGAGAGGGACATGCTAGACATAGACGTAAGCAAAAGCTGCACCAGTGGTTTCAACATCTTTGATCATTGGAATGCCATCATACAGCCTCAAGAGCTTAATAACTTGGCCTTTGCAGGATATATTTGA 990 0.4374 MERDPHNLEIQLPPGFRFHPSDEELVVHYLRNKVTSRPLPASFIADVDLYKFNPWELPSKALFGEDEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGTDKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMIFSYKQRGSMRLDDWVLCRVRRKISSPRNTWEESNEPSYEPASYFKNYESPDPEETDKTLVFNEFPMLPYILASETNTLPSTGNASSSLSNQRYGNAFVYEDTSNVEEQFSESAVESLKRKLYEQNQMDLYDSPPFKKPLREEDNERDMLDIDVSKSCTSGFNIFDHWNAIIQPQELNNLAFAGYI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00067 329 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Pral5409g00067 329 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Pral5409g00067 329 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Pral5409g00067 329 PANTHER NAC TRANSCRIPTION FACTOR 56 12 227 - -
Pral5409g00067 329 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Pral5409g00067 329 FunFam NAC domain-containing protein 72-like 21 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00067 Pral-Chr5409 256871 258138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5409g00067 11 175 NAC Transcription Factor Family AT1G61110 68.208 2.54e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5409g00067 NAM 7.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00067 - - gmx:100788799 411.379