Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00051 ATGGCCGATGACTTTGATTTTTCTGATCAAGGAGATGTGATTAAGAATTCTGAAGCCAAAGGATTCAATCCAGGGTTAATAGTTCTCCTGGTTGTTGGAGGGCTGCTATTGACATTCCTCATTGGAAATTATGCCCTTTACCTGTATGCGCAGAGAACCCTTCCTCCTCGAAAAAAGAAGCCAGTCTCAAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGCGTTTCTGCACCTGGAGAGTAG 246 0.4431 MADDFDFSDQGDVIKNSEAKGFNPGLIVLLVVGGLLLTFLIGNYALYLYAQRTLPPRKKKPVSKKKMKRERLKQGVSAPGE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00051 81 PANTHER DNA-BINDING PROTEIN S1FA2 9 81 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral5409g00051 81 MobiDBLite consensus disorder prediction 57 71 - -
Pral5409g00051 81 Pfam DNA binding protein S1FA 17 81 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral5409g00051 81 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00051 Pral-Chr5409 220110 221996 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pral5409g00051 S1FA 3.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00051 - - gmx:100499820 120.938