Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00046 ATGGGGAGGAAGGGAAATTGGTTTTCTACCGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAGATCAGAGATCAAGCAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGATCTCCTCAGACTCGTACGTGGGTTCTGGGAAAACAGCACGTCCCCCTGCTCCTCCACCTGAAGAAATTAAACCATATGATGTTAAGAATGAAGCCAGTCAAAGTCATGTTCATGAAGTTGCAACAGCTGTGGCAGCTGAGAGATCGATCCATGCTGTTCAGACTGCAGTTGCTACAATACAAGCCCCTAAGATCTCTCAGTTTGCCGGCAAATCAAGGGAAGAGGTGGCTGCAATAAAGATTCAGACAGCTTTTAGGGGATATCTGGCAAGAAGAGCTCTGCGAGCTCTGAGAGGGCTGGTCAGGTTGAGGACACTGATGGAAGGGCCAATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAACTTTAGCTCGCGTGCAATCCCAGATTCGTTCTAGGAGGATCAGGATGTTCGAGGAGAACCAGGCTCTGCAAAGGCAGCTCTTACACAAGCATGCAAAGGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTGCAATCAAAGGAACAAATTGAAGCCAAGTTACTACAAAAGTATGAGGCAGCTATGAGGAGAGAGAAAGCGCTCGCTTATGCATTCACTCATCAGCAAACATGGAAGAATTCATCCAGATCGATAAACCCAATGTTCATGGATCCAACAAATCCTTCTTGGGGATGGAGCTGGCTGGAACGATGGATGGCAGCTCGGACAAGGGAGAGCCAAAGCACAATGGAGAAAGAAATGAACGATGACCGTTCATCTGTGAGAAGTTCTAGCCGCAGCATCACTGGTGGAGAAATCAGCAAATCATATGCTCGTTACCAACTCAATTCTGAAAAGCATTCTCCCACAGCAAGCCAAATCCCCGACTCACCTAGCTTCCACTCTTATTCAACTCCTTCAAAGCCAGCTGCCAGAAGACTCAGGAAGGCCAGCCCAAAGAACAGCTTTGCAATGGACGATGACATTAGAAGCGTGGCCAGTGCGCAGTCAGGGCGGTTCCGGCGGCACACCATCGGTGGCGCGTCTGTGAGAGACGACGAGAGCCTTGCGAGCTCGCCGGCGGTTCCGAGTTACATGGTGGCGACTCAGTCTGCAAAAGCCAAGTCTAGGACGCACAGTCCGTTGGCAGCTGAGAACGGCACGCCACAGAAGGAGAAAGATAAAGGGTCCTTTGGGACAGTAAAGAAACGGCTTTCTTACCCGCCTTCACCAGCGAAACCATGGCGGCATTCAAGTGGGCCACCGAAGGTAGAAAACAATTTAAATGCAGAAATCGCTACGGGCAATGGTGGGGATGCTTAA 1431 0.4934 MGRKGNWFSTVKKAFSPESKKKEDQRSSKSKKKWFGKQKLEISSDSYVGSGKTARPPAPPPEEIKPYDVKNEASQSHVHEVATAVAAERSIHAVQTAVATIQAPKISQFAGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLRTLMEGPIVKRQATSTLRSMQTLARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIGEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSSRSINPMFMDPTNPSWGWSWLERWMAARTRESQSTMEKEMNDDRSSVRSSSRSITGGEISKSYARYQLNSEKHSPTASQIPDSPSFHSYSTPSKPAARRLRKASPKNSFAMDDDIRSVASAQSGRFRRHTIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTHSPLAAENGTPQKEKDKGSFGTVKKRLSYPPSPAKPWRHSSGPPKVENNLNAEIATGNGGDA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00046 476 MobiDBLite consensus disorder prediction 282 296 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 403 476 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 403 421 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 1 66 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 319 342 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 15 39 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 319 364 - -
Pral5409g00046 476 MobiDBLite consensus disorder prediction 281 305 - -
Pral5409g00046 476 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Pral5409g00046 476 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Pral5409g00046 476 Gene3D iswi atpase 112 150 - -
Pral5409g00046 476 Pfam Protein of unknown function (DUF4005) 392 458 IPR025064 -
Pral5409g00046 476 PANTHER IQ-DOMAIN 5-RELATED 1 446 - -
Pral5409g00046 476 SMART iq_5 114 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00046 Pral-Chr5409 189019 192193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5409g00046 1 461 IQD Protein Family AT5G03040 50.638 7.48e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00046 - - gmx:100800080 617.461