Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00019 ATGCCGCCTAAGCAGCAATCGAAAGCTGATTTAGCAAAGAAGCAGAAGATCGTAGAGGATAAAACGTTTGGTCTAAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAAAGCCTCAAGCAGTCCGTGCAGCCAAAGCCTGATCCTTCCAAAACCGCTGCCAAGAAAAAGAAGGAGGAGGACAAGGCCAAGGAAAAGGAGCTAAATGAGTTGTTCAAAATGGCTATTACCCAGCCTAAAGTGCCAGTTGGTGTTGATCCCAAGTCCATAGTATGTGAGTTCTTTAAAGCAGGACAGTGTACCAAGGGCTTTAAATGCAAGTTCTCACATGATTTGAATGTCCAGAGGAAAGGGGAAAAGATTGACATTTACAGCGACAAGCGGGACCAGGAAACGATGGAGGATTGGGATCAAGAGACTTTGGAGAAGGTGGTGGAGTCAAAGAAAACCGAGTATCAACAGAATAAACCAACTGACATAGTCTGTAAGCATTTTTTGGAGGCAGTGGAGAAGAAGCAGTATGGTTGGTTTTGGGTCTGCCCAAATGGTGGTAAGAATTGCCACTATAGACATGCCCTCCCCCCTGGATATGTTCTAAAATCTCAAATGAAGGCCCTGTTGGAGGAAGAAGCCGAAAAGATGCCAATTGAGGAGGAGATTGAAGATCAGCGCTCCAAATTGAAAACTACTACTCCTATGACTCCTGAGCTATTCGTGCAATGGAAGAAGAAGAAGATTGCAGAAAGAGATGCCAGTTTGGCTGAACAACAGGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGCGAGCTATTTTTGTCTAATGCTAGCTTCTTTGTGGATGATATTGACGCATGTGACAAGTATCAAAGAGAGTCAGAATCTAACGATAATGAGCAGAAGCCACAGGCAAATGGTGATGCTGATGGTGGTCCTAGCACCTCAACAGCAGCTGATGCTGATGCTAAAGGAGACACTAATGTTGAATCAATTGATGTAGACGATGATGATGAGCTAGACATGGATGAATTGAATGAATTGGAAGCAAGTTTATCGAGGACAACGATCCAAATAAAGGAGCCGGGAGCTGAAGCTTAA 1104 0.4384 MPPKQQSKADLAKKQKIVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDPSKTAAKKKKEEDKAKEKELNELFKMAITQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDQETMEDWDQETLEKVVESKKTEYQQNKPTDIVCKHFLEAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEAEKMPIEEEIEDQRSKLKTTTPMTPELFVQWKKKKIAERDASLAEQQAERAKNDRMSGRELFLSNASFFVDDIDACDKYQRESESNDNEQKPQANGDADGGPSTSTAADADAKGDTNVESIDVDDDDELDMDELNELEASLSRTTIQIKEPGAEA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00019 367 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 365 - -
Pral5409g00019 367 MobiDBLite consensus disorder prediction 39 65 - -
Pral5409g00019 367 Gene3D - 87 204 - -
Pral5409g00019 367 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Pral5409g00019 367 Coils Coil 246 266 - -
Pral5409g00019 367 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Pral5409g00019 367 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Pral5409g00019 367 Pfam DRG Family Regulatory Proteins, Tma46 216 294 IPR032378 -
Pral5409g00019 367 Gene3D - 205 279 - -
Pral5409g00019 367 MobiDBLite consensus disorder prediction 332 347 - -
Pral5409g00019 367 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Pral5409g00019 367 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Pral5409g00019 367 MobiDBLite consensus disorder prediction 292 367 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral5409g00019 DFRP_C 1.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00019 - - pcin:129300775 638.647