Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00014 ATGACGAGGGGTGCCCTGATGAGTGTTAATGGTGACGATAAAGAGTTACAAGAATTGACTCATCATCTACAAGTTGGGAAGAAAATCCTTAAAGATGGAGTTACTGGTGAGGAACATGGATTACATGAGAAAAATGAATTGAAAGTTAATGGAATGGTTGAAGAATTTAATGTTGGACAAGGGGAGACGGTGAAAGGGCCTGTTGTCCAGCCTGTAACAAAGCAGCAAACTCATGGGGAAATTGTTTGCTGGGAGAGGTTTTTACATCTTGGATCCCTTAAGGTTTTGCTTGTGGAGAATGATAACTCTACTCGCCATGTTGTCACTGCACTGCTTCGCAATTGTTGTTATGAAGTTATTGAAGCTGCAAATGGATTGCAGGCATGGAAGATGTTGGAGGATTTAACTAATCATATTGATCTCATTTTAACTGAAGTGGCAATGCCTTGCTTCTCAGGAATTGGTCTTCTATGTAAGATTATGGGTCACCAAGCACGAAAGAACATTCCAGTGATTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGCTTGTCAAGGGGTGCTGTTGACTTTCTTGTAAAACCCATACGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGCGATGCCATAGTTCTAGTGGAAGCGGGAGTGAAAGTGGCACACAAACCCAGAAGTCTGTAAAATCAAAGAGTCTTGAGGAGTCTTCTAACAACGCTGACAGCAATAATGAGGACAACAACAGAAGTGAAGATATAAATAACGGGAATGGAAGTGACAATGGTAGTGGAACTCAGACCTCCTGGACCAAACAAGCTGTCGAAGTAGACAGTCCCAAACAAGTACCTCAGTGGGATCAAATAGTGGACTATCCTCTTAGCACCTGCGCTCAATTCCCTCACTCCAATGCCCAAATATGTGATGAAAAGATGGTTCCTCTGGCCACGAAGTGTTGTCCCAAACATAAGAAACAACTTGTCAAAGAGCTGGAAGTTGACTCAAGTACAGAGCTTGACTTAACTGTTGACAATGGGAATGAGTTTCCCGTCAAAATTTCAGTAGAAAAGCACGGTATCCATCTTGATGTGGGCTCCTCTAAATGCAATGGGCTGATTAGTAGAGGACAGCTGGATCTTAATTGTGAGAATCCATCAGGCATGCTACGGCCCAATGGTCCTTCAGTGTCTGATGGCATTACTGATGAAGAGTTTGAAGCCCAAAATAGAAGACACGGTCTCTCAGATATTGAAAATAAAGCTACTAATGATGACGAGTTACCATCTCCTGAGATCAGTTTAAAGAGACTCAGAGGAGGAGGAGATGCCAGAACCACAATTCAGGACAAACAGAATGTTGCAAGATGTTCAGCCATTTCGGCCTTCTCAAGGTACAATGGAAGCTCTAACACTAAGAGGTCTCCCACTGAATGTGTCAGAACTGGAAGTAACTCTCGGGATAACGATAGCTTAGAAGTTACAAAGAAAGATTTATCATGTGAAATTCAATCTCATTCCAATGGCAATCCTTCCCACCGGAGCTCAAATGGTGGAAGCAATGACATTGATATAGGTTCCTCTGCTAATAATGCTTTTACTAAAATTGAAGTCTCAAGTGAACAAGCGGTAGCATCAACAGCCAGATGTTTGTGCCATGTTTCTGCTGTCCAGCCTATAAGCAGTGACCTATGTACCCTTCAACAAGTTGTATTTCATAGTAGCAAAGACATGACTACAGTGACAATGCTAACACCAAAAGGAGGCATACATAAAGATTATCATAGTGAGGACTTTCATTACCAATTTGAAAACCATGACAGTATTGCTGACAAGCAGTACTGGCAGCTACCTGACCATGTTGATTCAACATTCAAGGAAATGGCCGTAGCTGCACCACATTATGGGTCATCTAATGTGGTGGAAATGCTGGTTGAATGTAATACTGGAGATAACAGTGTTGACAGAAGGGCATCAGGCAGCAATAATGGAAGCGACAGACTAAATGGGAGCAGCACTGCTGTTGCTGACAGGGAGACAAACATAGAGGGTGCCAATAGAAGTGGTGATGCTAGTGGGAGTAAGAGTTGGAGCGGGAATAAGAGTGCTAACAGGGTAGATCAAAACAAGACCTCCAAGAGAGAAGCAACCTCGAGTAAGTTTGGCCTTAAGAGAAAGGAGAGTTGCATCCATAAAAAGGCCCAACATCAAAGTAGAAAGAAACTAGCTGAAGAACGGACTCACTTTTGTGGACAATTTGTTCACAAGTCCACAAACGAAAATGCACCAGAGGCAGAGGATAAATGA 2316 0.424 MTRGALMSVNGDDKELQELTHHLQVGKKILKDGVTGEEHGLHEKNELKVNGMVEEFNVGQGETVKGPVVQPVTKQQTHGEIVCWERFLHLGSLKVLLVENDNSTRHVVTALLRNCCYEVIEAANGLQAWKMLEDLTNHIDLILTEVAMPCFSGIGLLCKIMGHQARKNIPVIMMSSHDSMGLVFKCLSRGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEESSNNADSNNEDNNRSEDINNGNGSDNGSGTQTSWTKQAVEVDSPKQVPQWDQIVDYPLSTCAQFPHSNAQICDEKMVPLATKCCPKHKKQLVKELEVDSSTELDLTVDNGNEFPVKISVEKHGIHLDVGSSKCNGLISRGQLDLNCENPSGMLRPNGPSVSDGITDEEFEAQNRRHGLSDIENKATNDDELPSPEISLKRLRGGGDARTTIQDKQNVARCSAISAFSRYNGSSNTKRSPTECVRTGSNSRDNDSLEVTKKDLSCEIQSHSNGNPSHRSSNGGSNDIDIGSSANNAFTKIEVSSEQAVASTARCLCHVSAVQPISSDLCTLQQVVFHSSKDMTTVTMLTPKGGIHKDYHSEDFHYQFENHDSIADKQYWQLPDHVDSTFKEMAVAAPHYGSSNVVEMLVECNTGDNSVDRRASGSNNGSDRLNGSSTAVADRETNIEGANRSGDASGSKSWSGNKSANRVDQNKTSKREATSSKFGLKRKESCIHKKAQHQSRKKLAEERTHFCGQFVHKSTNENAPEAEDK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00014 771 MobiDBLite consensus disorder prediction 217 272 - -
Pral5409g00014 771 ProSiteProfiles CCT domain profile. 717 759 IPR010402 GO:0005515
Pral5409g00014 771 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Pral5409g00014 771 PANTHER TWO-COMPONENT RESPONSE REGULATOR 94 315 IPR045279 GO:0009736
Pral5409g00014 771 SMART REC_2 93 208 IPR001789 GO:0000160
Pral5409g00014 771 MobiDBLite consensus disorder prediction 469 526 - -
Pral5409g00014 771 FunFam Two-component response regulator-like PRR37 93 252 - -
Pral5409g00014 771 MobiDBLite consensus disorder prediction 504 526 - -
Pral5409g00014 771 Gene3D - 92 259 - -
Pral5409g00014 771 MobiDBLite consensus disorder prediction 414 436 - -
Pral5409g00014 771 SUPERFAMILY CheY-like 92 217 IPR011006 -
Pral5409g00014 771 MobiDBLite consensus disorder prediction 655 709 - -
Pral5409g00014 771 MobiDBLite consensus disorder prediction 710 728 - -
Pral5409g00014 771 MobiDBLite consensus disorder prediction 655 746 - -
Pral5409g00014 771 MobiDBLite consensus disorder prediction 469 492 - -
Pral5409g00014 771 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Pral5409g00014 771 MobiDBLite consensus disorder prediction 414 450 - -
Pral5409g00014 771 CDD psREC_PRR 95 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00014 Pral-Chr5409 54048 61305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5409g00014 81 283 Response Regulator Gene Family AT5G60100 66.667 1.79e-78 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5409g00014 Response_reg 2.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00014 K12129 - gmx:100796933 819.305