Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00011 ATGGATGTTAAAGAAGCAGAAAGGGTAGTTGTTGCTAAACCAGTAGCTTCAAGGCCGAGTTGCCCCCCTTTGAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCCTCTCCATCTCCTGAATCTTCTCAAGCCACAGTTTCAGCCATTAGACCGAAGACTGTGAGGTTCAAGCCAGCCGTGAATCGCCCGCCCCCTGCTGGGTTTATTTCTTCTGAGGCAAGCCCATCTTACAAAAGTCATAAATCAGACACTAATCAAACAGTTGTTTACAAGCCTACGGCTAAGTTTGTCTCCAAGGCCACTGTTTCTCTGCTGGCAAATATGGGAAATTATAGTACCACTCATAGCCAGCAGCTTCAACATCCCAATCAGGAGAAACCGAGGACCAATTTGAGCTCAATTAATCATCAGAATAATAACACCCCAGGCGCTGAATCAAATCTGGCAATTGAATGTTTCAAGGTGGTACAGCAGGCCCCAGAGGAGGACCAGAAAACTTCGCCATCTACTAGTAATGGTGGTGATAGACCTTGTTATGATGGGTATAACTGGAGGAAATATGGGCAGAAGCAAGTTAAAGGAAGCGAGTATCCAAGGAGTTATTACAAATGCACGCATCCTAATTGTCCAGTGAAGAAGAAGGTTGAAAGATCATTTGATGGGCAAATTGCAGAAATTGTGTATAAAGGGGAGCACAACCATTCGAAGCCTCAGCCTCCTAAGCGCAACTCAGCTGGAGCACAAGGATCAGGAATCGTGTCGGATGGATTGGGTCAAGATACTAATTATAATAAGCATCTATGGGGTAATCCTAACAGTGAGAAGAATGAAAATAGAATAGAGAACCAGAGTGAATCAGGCTATCTTGTCAAGGCTGGAGGAAGCCCTGTGAATTCATATGCTCAAAGTGAGGAATGTGAGGAAGGAAGCAAGGGAAATGAAGTGGCGGAAGATGAACCAAAGAGTAAAAGAAGGAAAAACGAGAATCAATCCAATGAAGTAGCAGTGGCAGAGGAAGGTTTAGTGGAGCCTCAAGTGGTGGTTCAGAGTTCTACAGATTCTGAAGTACTTGGGGACGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGCAATCCACATCCCAGAAGTTATTATAGATGCACTAACATAAAGTGCAGCGCCCGTAAACATGTGGAAAAATCAATTGATGACCCAAAAGCATTTATCACTACATATGAGGGGAAACACAACCATGAGATGCCACGCAAAACTGTAGGTGCTGTGGCCTCTGACAAAGTCAAGCCATGA 1302 0.4493 MDVKEAERVVVAKPVASRPSCPPLRSFSELLAGAINASPSPESSQATVSAIRPKTVRFKPAVNRPPPAGFISSEASPSYKSHKSDTNQTVVYKPTAKFVSKATVSLLANMGNYSTTHSQQLQHPNQEKPRTNLSSINHQNNNTPGAESNLAIECFKVVQQAPEEDQKTSPSTSNGGDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQPPKRNSAGAQGSGIVSDGLGQDTNYNKHLWGNPNSEKNENRIENQSESGYLVKAGGSPVNSYAQSEECEEGSKGNEVAEDEPKSKRRKNENQSNEVAVAEEGLVEPQVVVQSSTDSEVLGDGFRWRKYGQKVVKGNPHPRSYYRCTNIKCSARKHVEKSIDDPKAFITTYEGKHNHEMPRKTVGAVASDKVKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00011 433 MobiDBLite consensus disorder prediction 241 291 - -
Pral5409g00011 433 MobiDBLite consensus disorder prediction 160 185 - -
Pral5409g00011 433 MobiDBLite consensus disorder prediction 116 146 - -
Pral5409g00011 433 MobiDBLite consensus disorder prediction 309 334 - -
Pral5409g00011 433 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 MobiDBLite consensus disorder prediction 37 51 - -
Pral5409g00011 433 MobiDBLite consensus disorder prediction 162 178 - -
Pral5409g00011 433 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 MobiDBLite consensus disorder prediction 37 87 - -
Pral5409g00011 433 FunFam WRKY transcription factor 166 240 - -
Pral5409g00011 433 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 Gene3D WRKY domain 167 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 421 IPR044810 GO:0003700
Pral5409g00011 433 SUPERFAMILY WRKY DNA-binding domain 353 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5409g00011 433 FunFam WRKY transcription factor 347 420 - -
Pral5409g00011 433 MobiDBLite consensus disorder prediction 232 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00011 Pral-Chr5409 43863 47863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5409g00011 351 433 WRKY Transcription Factor Family AT2G37260 43.182 5.18e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5409g00011 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00011 - - gmx:100794069 555.058