Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00009 ATGGGTTGGATTCCCTGTTCTGGAAATTCAAACACTAAGAAGAAGACAAAGAAGCAGACGAAGAAAACGGAGGTGCAGGAGAACATGATTGATCCGATAAAAGCAGCCCCAGGGAAGTTGAAGAGGAATTCATCTACAAATTCCAAGGATACCTCTAAAAGTGGGAACCCTGATCACATAGCAGCACAGACTTTCACATTTCGTGAGTTGGCTACGGCGGCTAGAAATTTTAGAGCTGAATGCTTGCTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTAATAATCAGGTTGTTGCAATTAAGCAACTTGACCGAAATGGGCTGCAAGGAAATAGAGAATTCCTAGTTGAAGTGTTGATGTTAAGTCTACTACACCACCCTAACCTTGTCAGCCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGGTCCTTGGAAGACCACTTGCATGATGTTTCTCCTGGCAAGAAGTGTCTCGACTGGAATACAAGAATGAAAATAGCAGCTGGGGCAGCAAAAGGGTTGGAATATCTGCATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTGAAGTGCTCAAACATTTTGCTTGGTGAAGGGTATCATCCAAAGTTATCTGATTTTGGCTTGGCCAAGCTTGGACCAGTTGGGGAGAACACTCACGTGTCAACGAGGGTTATGGGAACCTACGGTTATTGTGCTCCAGAGTATGCAATGACAGGACAACTGACTCTGAAATCAGATGTCTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAATTCAAAGGCTGCGGGAGAACAGAATCTTGTGGCATGGGCGAGACCTTTGTTTAAAGATCAACGAAAATTTTCACTAATGGCGGATCCAATGCTCGAAGGTCAGTATCCTTCAAGGGGCCTATGCCAGGCCCTTGCAGTTGCTGCGATGTGTGTTCAGGAGCAGGCTAACATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGACTTATCTTGCTTCACAAAGATATGACCCAAGTACGCAATCACTCCAGGGGTCTCGCCTCTCTCCGGCCACTCCTAGAACCAAGAGGCGGCAGTGA 1149 0.45 MGWIPCSGNSNTKKKTKKQTKKTEVQENMIDPIKAAPGKLKRNSSTNSKDTSKSGNPDHIAAQTFTFRELATAARNFRAECLLGEGGFGRVYKGRLESNNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDVSPGKKCLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDQRKFSLMADPMLEGQYPSRGLCQALAVAAMCVQEQANMRPVIADVVTALTYLASQRYDPSTQSLQGSRLSPATPRTKRRQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00009 382 MobiDBLite consensus disorder prediction 363 382 - -
Pral5409g00009 382 Gene3D Transferase(Phosphotransferase) domain 1 154 370 - -
Pral5409g00009 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Pral5409g00009 382 MobiDBLite consensus disorder prediction 40 59 - -
Pral5409g00009 382 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Pral5409g00009 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5409g00009 382 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
Pral5409g00009 382 PANTHER OS07G0668900 PROTEIN 16 363 - -
Pral5409g00009 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Pral5409g00009 382 MobiDBLite consensus disorder prediction 1 59 - -
Pral5409g00009 382 Pfam Protein tyrosine and serine/threonine kinase 81 348 IPR001245 GO:0004672|GO:0006468
Pral5409g00009 382 CDD STKc_IRAK 83 352 - -
Pral5409g00009 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5409g00009 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pral5409g00009 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00009 Pral-Chr5409 37799 41301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5409g00009 37 356 Glycoside Hydrolase AT3G07070 67.812 9.90e-164 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5409g00009 PK_Tyr_Ser-Thr 8.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00009 - - gmx:100776041 675.626