Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5409g00004 ATGGTTCGATCCTGCTGGAAACCATCTGTAGAAGGTGAGGATGGAGACTTGAATGGGAGAGTCGATGGACTGCTGTGGTATAAGGATTTGGGTGACCATTTGTACGGGGAATTCTCAATGGCTGTAATTCAGGCCAATAGTTCATTGGAGGATCGATGCCAACTCGAATCTGGACCCTTCACTTCCAACCATTTGGGTCCTCAAGGGACCTTCATAGGGGTCTATGACGGCCATGGGGGATCAGAGGCCTCGCAGTTCGTCGCAGACAATCTCTTCTTCCATCTCAACAGGTTTGCGAGTGAAAAGCAAGCCATGTCAGAAGATGTGATCAAAAGAGCATTTTATGCGACAGAAGGGGAATTCCTGTCGGTTGTGAAGAAGCAGTGGCTAAGTAGGCCAGAGATTGCATCCACAGGAACATGTTGCTTGGTTGGGATAATTTGCAACGACATGCTATATGTTGCAAATGCTGGGGATTCCAGAGTGGTATTAGGAAGAGAAGAGAAAGCAACCAGAGATATGGAAGCTATCCAATTATCCGCAGAACACAATGTCAACATCGAAACTGTGAGAGATGAACTTCGGTCCAAGCACCCTTATGATTCACAAATTGTGGTCGCCAAGCACAATGTTTGGCGAGTGAAAGGCCTTATCCAGGTTTCAAAATCCATCGGCGATGCGTATTTGAAGAAGACAGAATTTAACAGGGAGCCCCTGCCATTCAAGTATAGATTGCCTGAGCCCATGTTTAAGCCAATTCTTAGTTGTGAGCCATCAATATCAACCCATAAACTCGAACCACGGGATCAATTTCTCATCTTTGCTTCTGATGGATTATGGGAGCATCTCAGCAACCAAGAGGCTGTTAACATTGTGAGCAATAACCCACGAAATGGGATTGCTAGGAGGCTTGTGAAGGCTGCACTTCGGGAAGCGGCAAGGAAAAGAGAGATAAGATTCTCGGACCTGCAAAAGATAGAAGAAGGAGTGAGGAGACACTTCCATGATGACATAACAGTAATTGTTGTATTTCTAGATCCCAAACTGACTCATGATGGGCACGGCTCTCTCTGGGACCTTCCCCTTTCAATCAGAGGAGGTGGCTCTGCCAACTCTTAG 1119 0.4638 MVRSCWKPSVEGEDGDLNGRVDGLLWYKDLGDHLYGEFSMAVIQANSSLEDRCQLESGPFTSNHLGPQGTFIGVYDGHGGSEASQFVADNLFFHLNRFASEKQAMSEDVIKRAFYATEGEFLSVVKKQWLSRPEIASTGTCCLVGIICNDMLYVANAGDSRVVLGREEKATRDMEAIQLSAEHNVNIETVRDELRSKHPYDSQIVVAKHNVWRVKGLIQVSKSIGDAYLKKTEFNREPLPFKYRLPEPMFKPILSCEPSISTHKLEPRDQFLIFASDGLWEHLSNQEAVNIVSNNPRNGIARRLVKAALREAARKREIRFSDLQKIEEGVRRHFHDDITVIVVFLDPKLTHDGHGSLWDLPLSIRGGGSANS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5409g00004 372 SMART PP2C_4 31 343 IPR001932 -
Pral5409g00004 372 SUPERFAMILY PP2C-like 44 346 IPR036457 -
Pral5409g00004 372 CDD PP2Cc 35 345 IPR001932 -
Pral5409g00004 372 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Pral5409g00004 372 Gene3D - 29 353 IPR036457 -
Pral5409g00004 372 FunFam Phosphatase 2C family protein 26 354 - -
Pral5409g00004 372 Pfam Protein phosphatase 2C 57 314 IPR001932 -
Pral5409g00004 372 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Pral5409g00004 372 PANTHER PROTEIN PHOSPHATASE 28 343 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5409g00004 Pral-Chr5409 11731 14174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5409g00004 1 368 PP2C-type Phosphatase Gene Family AT3G12620 65.591 4.24e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5409g00004 K01102 - gmx:100814123 580.482