Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5398g00002 ATGGAGAATTACGCGTACCCTTCGTACCCTGACTCAGGCGAGTCGTCTCCTCGCTCCAGAGAGGTTGAATTCGAGAACCCTCCGCCGTGGGACGATCAGCAGCCGCCGCCCAATTACAAAGCTAAATTTATGTGCAGCTATGGCGGGAAGATCCAGCCTCGTAGCCACGACAATCAGCTCTCCTACGTCGGCGGCGAGACCAAGATCCTCGCCGTTGACCTCAACATCAAGTTCTCCACCATGATTTCCAAGCTCTCTGCCCTCTGCGACGGCGTTGATGTCACCTTTAAGTACCAGCTCCCCGGAGAAGAACTCGACGCCCTGATTTCCGTCACCAACGACGACGATCTAGAGCACATGATGCACGAGTACGATCGGCTGTACCGTGCTTCCGCTAAGCCCGCTCGCATGAGGCTCTTCCTCTTCCCTGCTAATACTAGCCAGACATCGAGTTTTGCCTCCGATCAGGACCGCTTCGTCGAGGCTCTCAACACGGCTCCGGGTCCGACTCCACCCGATACGGTTAAGCCGGCTCCTGTTCCTGGCAGCAACGTCGATTTCCTCTTCGGTCTGGAGAAAGGAGTACCGCCAGCGCAGCCACCGCCTGTGGCTGTTAAGTTTCATGACCCTGTTCCTGGACCTGTGGTGCCACCTCTGGAGTACCAAACAAGAGGTGGCCCTGAACGGGTCATGGGTTCGGATCCTTCTGTGAACCCGATTGAAGTTCAACGGCAGTTGCAGAGGATGCAAATTGGGGAGCATGATCAACCTGTGTATAGGAGAAAAAGCGAGGACAATTCAGCGGGAGGATATGCAGCTGGAGATTATTATGTTCAGAAATTTGCCGACAAGGCTCCTCCATCGAATTTGCCGGCCACAGCACCACCAGCTGGAGGTTATTGGCAGGAAAAGCAAGTTCATAGCGAGGGTTTTCAGCCTATGACGGCGTCAAACGGATCTGGAGGAGCAGACCAGCCGGTTTATGTTATCCCGCAGCCCGGAACTTTCTATCACGCGCCGCCGGTGGTACGTCCTCAGGCGGCACCAGCCACTCAAGGTTACTACGCAGTGCAGCGAATGGTTTCTGATGCCTACCGTGAGCAGCCAGTTTACAGCGCGTCGGCGGCGCCCCGAGCGCCATTTTCATCAGCGGCTCCGGCAACCTTGGCACCGGCTCAGCCTGTTAAACCTGGCGCTTATACAGATGGATTCAACGTGGTTCGCCCGACTGGGATGCCGGATAACTCAGCAGCGTATGCACAGGTGGCGTACGATAACTCAGCAGGGAGACAGTTTTACTACACTGCGCCGGGAGGAGTGATGCATCCGCCACAGTACCAAGGGGTTGTTCCGACGGCGGGCGCTGATATAAGACCCTCCGGAGTATCAATGGGTCAAGATCCTAAAGGGGTCAACAAGGTTTCCCAAGGTTAA 1434 0.5586 MENYAYPSYPDSGESSPRSREVEFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDLNIKFSTMISKLSALCDGVDVTFKYQLPGEELDALISVTNDDDLEHMMHEYDRLYRASAKPARMRLFLFPANTSQTSSFASDQDRFVEALNTAPGPTPPDTVKPAPVPGSNVDFLFGLEKGVPPAQPPPVAVKFHDPVPGPVVPPLEYQTRGGPERVMGSDPSVNPIEVQRQLQRMQIGEHDQPVYRRKSEDNSAGGYAAGDYYVQKFADKAPPSNLPATAPPAGGYWQEKQVHSEGFQPMTASNGSGGADQPVYVIPQPGTFYHAPPVVRPQAAPATQGYYAVQRMVSDAYREQPVYSASAAPRAPFSSAAPATLAPAQPVKPGAYTDGFNVVRPTGMPDNSAAYAQVAYDNSAGRQFYYTAPGGVMHPPQYQGVVPTAGADIRPSGVSMGQDPKGVNKVSQG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5398g00002 477 CDD PB1_UP2 44 142 - -
Pral5398g00002 477 SMART PB1_new 55 144 IPR000270 GO:0005515
Pral5398g00002 477 MobiDBLite consensus disorder prediction 1 38 - -
Pral5398g00002 477 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 144 - -
Pral5398g00002 477 Gene3D - 61 143 - -
Pral5398g00002 477 PANTHER OS05G0427100 PROTEIN-RELATED 9 365 - -
Pral5398g00002 477 Pfam PB1 domain 56 143 IPR000270 GO:0005515
Pral5398g00002 477 SUPERFAMILY CAD & PB1 domains 56 152 - -
Pral5398g00002 477 MobiDBLite consensus disorder prediction 458 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5398g00002 Pral-Chr5398 21005 29170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5398g00002 39 165 MAP Kinase Kinase Kinase AT5G57610 43.284 4.00e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5398g00002 - - qsa:O6P43_031693 634.024