Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5395g00051 ATGGAGTCCAGCGATCCAATCCCAAACACCCCAAGTCCTACTTCCTCCGTCCCTCTCTCTAACTCTCCTTCGTCCTCATCTTCCCCTCCAAATATCACTCCGCAAGTCGTCGTAAGCCCTTGTGCTGCTTGTAAGATTTTAAGGCGCAGATGTGCAGAAAAATGCGTTCTCGCCCCTTATTTCCCTCCTTCTGAGCCTGCTAAGTTCACCATTGCTCACAGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAATCGCAGCGAGCTGATGCGGTGAGCAGTATGGTGTACGAGGCAGGTGCAAGAATAAGAGACCCGGTTTATGGCTGTGCAGGTGCGATTTGTCAGCTTCAGAAACAAGTGAACGAGCTTCAAGCTCAATTGGCGAAGGCACAAGCAGAGCTAGTGAACATGCAGTTACAGCAAGCCAATCTGGTGGCTCTTCTCTGCATGGAAATGGCCCAAACTACTCAAACTGATCAGACTCATCATCAAACGTCTCCTACAAGTACTCCTCAGGAATATTCTTCACCGCCATCATCATCCTTCGAAGATACGAACTTCATTACTTCAAGCAACCTCAACTTCTTCGCGGAAAGCTCTGGCCTTAACTCTTTGTGGGAGCAGCCACTTTGGATATGA 657 0.4886 MESSDPIPNTPSPTSSVPLSNSPSSSSSPPNITPQVVVSPCAACKILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALLCMEMAQTTQTDQTHHQTSPTSTPQEYSSPPSSSFEDTNFITSSNLNFFAESSGLNSLWEQPLWI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5395g00051 218 MobiDBLite consensus disorder prediction 164 189 - -
Pral5395g00051 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 39 180 - -
Pral5395g00051 218 ProSiteProfiles LOB domain profile. 39 140 IPR004883 -
Pral5395g00051 218 Coils Coil 119 146 - -
Pral5395g00051 218 MobiDBLite consensus disorder prediction 1 32 - -
Pral5395g00051 218 Pfam Lateral organ boundaries (LOB) domain 40 137 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5395g00051 Pral-Chr5395 269048 270639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5395g00051 35 217 AS2 family AT1G07900 63.243 1.97e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5395g00051 LOB 2.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5395g00051 - - gmx:100789504 265.774