Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5395g00037 ATGGATTACATCGACAACTTACCGCCGATGGATCTGATGCGCTCCGAGAAAATGACCTTCGTTCAACTGATCATGCCGGTCGAGTCCGCTCATCGAGCTATCTCTTATTTGGGCGAACTTGGCCTCCTCCAATTCCGAGATTTGAACGATGATAAAAGCCCCTTCCAAAGAACCTTTGCTAATCAGGTAAAGCGGTGTGCAGAAATGTCAAGAAAGCTACGGTTCTTCAAGGATCAACTCAATAAAGCTGGTCTGATGTGTTCTCCTTCCCTTACCTTGCAACCTGATATTGAGCTAGAGGAATTAGAGATACAGCTTGCTGAACATGAACATGAGCTAAATGAAATGAACTCTAATAGTGAGAAACTTCAGCAGTCATATAATGAGCTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGCATCGAGTCATAGCCATGCTGCTATAGAGGAGAGAGAACTGGAGGAGCATGTATACTCCAATAATGATGCTTATGTTGAGAGTGCATCTTTGCTTGAACAGGAAACAAGGCCTGGATCTTCAAATCAATCTGGTTTAAGATTTATCAGCGGGATAGTTTGTAAACCTAAAGTTCTCAGGTTTGAAAGGATGCTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAACCAGGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAACAGAGATGGTTGAGAAAACAGTGTTTGTTGTATTTTTCTCTGGGGAGCAGGCACGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTGCCTGAAGATATACATAAACACAGGCAAATAACGAGGGAGGTTTCATCACGCCTTGTCGACTTAGAAGCAACTTTGGATGCTGGTATTAGGCACAGGAATAAGGCCCTTGCTTCCATAGGGGGTCACTTAGCAAAATGGATAAATATGGTAAGAAGAGAGAAGGCTGTGTATGATACGCTCAACATGCTTAATTTTGACGTCACAAAAAAATGCCTAGTTGGAGAGGGATGGTGCCCCATATTTGCTAAAACACAGATCCAGGAGGCACTGCATCGTGCAACTTTTGATAGTAATTCTCAAGTTGGCATAATCTTTCATCCGATGGATGCAGTGGAATTGCCGCCTACTTATTTTAGAACCAACCGCTTTACCAGTGCTTTCCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAGGAAGCAAACCCTTCAGTTTATACTGTAATTACATTCCCATTTCTTTTTGCTGTGATGTTTGGGGACTGGGGTCATGGAATCTGCCTGTTGATAGGAGCATTATTTCTGATAGCACGTGAAAGCAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGAGGGCGCTATGTGCTTCTTTTGATGGCACTGTTTTCAATCTACTGTGGGCTAGTCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTAGATCTGCTTATGATTGCCGAGATACTTCGTGCAGGGATGCACATACTGCTGGCTTAGTCAAATACCATGGTACATACCCATTTGGTGTGGATCCCAGCTGGCGAGGAAGTCGATCAGAATTGGCTTTTCTGAACTCACTCAAGATGAAGATGTCCATTCTTTTGGGAGTGGCACAGATGAACGTAGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGTAACTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTGTTTGGGTATCTTTCCCTTCTCATTATCGTTAAGTGGTGTACTGGGTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTTTAAGTCCCACTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCTTCTTCAGAGATCATCGTGTACAGATTGTGTTATTGCTGTTGGCTGTAGTTGCAGTTCCTTGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCAGACAGAGAGATATCAAGGACATGCTTATGA 2040 0.4211 MDYIDNLPPMDLMRSEKMTFVQLIMPVESAHRAISYLGELGLLQFRDLNDDKSPFQRTFANQVKRCAEMSRKLRFFKDQLNKAGLMCSPSLTLQPDIELEELEIQLAEHEHELNEMNSNSEKLQQSYNELLEFKIVLQKACGFLASSHSHAAIEERELEEHVYSNNDAYVESASLLEQETRPGSSNQSGLRFISGIVCKPKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDIHKHRQITREVSSRLVDLEATLDAGIRHRNKALASIGGHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALHRATFDSNSQVGIIFHPMDAVELPPTYFRTNRFTSAFQEIVDAYGVARYQEANPSVYTVITFPFLFAVMFGDWGHGICLLIGALFLIARESKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLVYNEFFSVPFHIFGRSAYDCRDTSCRDAHTAGLVKYHGTYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNVGIILSYFNARFFGNSVDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRLLQRSSCTDCVIAVGCSCSSLDALSKTFYIKEASDREISRTCL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5395g00037 679 Pfam V-type ATPase 116kDa subunit family 36 644 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral5395g00037 679 Coils Coil 99 126 - -
Pral5395g00037 679 PIRSF ATP6V0A1 8 653 IPR026028 GO:0000220|GO:0046961
Pral5395g00037 679 PANTHER VACUOLAR PROTON ATPASES 12 650 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5395g00037 Pral-Chr5395 213467 221058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5395g00037 2 650 Primary Pumps ATPases(2) AT2G28520 79.661 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5395g00037 K02154 - gmx:100793301 1123.23