Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5395g00036 ATGGATTACATCGACAACTTACCGCCGATGGATCTGATGCGCTCCGAGAAAATGACCTTCGTTCAACTGATCATGCCGGTCGAGTCCGCTCATCGAGCTATCTCTTATTTGGGCGAACTTGGCCTCCTCCAATTCCGAGATTTGAACGATGATAAAAGCCCCTTCCAAAGAACCTTTGCTAATCAGGTAAAGCGGTGTGCAGAAATGTCAAGAAAGCTACGGTTCTTCAAGGATCAACTCAATAAAGCTGGTCTGATGTGTTCTCCTTCCCTTACCTTGCAACCTGATATTGAGCTAGAGGAATTAGAGATACAGCTTGCTGAACATGAACATGAGCTAAATGAAATGAACTCTAATAGTGAGAAACTTCAGCAGTCATATAATGAGCTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGCATCGAGTCATAGCCATGCTGCTATAGAGGAGAGAGAACTGGAGGAGCATGTATACTCCAATAATGATGCTTATGTTGAGAGTGCATCTTTGCTTGAACAGGAAACAAGGCCTGGATCTTCAAATCAATCTGGTTTAAGATTTATCAGCGGGATAGTTTGTAAACCTAAAGTTCTCAGGTTTGAAAGGATGCTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAACCAGGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAACAGAGATGGTTGAGAAAACAGTGTTTGTTGTATTTTTCTCTGGGGAGCAGGCACGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTGCCTGAAGATATACATAAACACAGGCAAATAACGAGGGAGGTTTCATCACGCCTTGTCGACTTAGAAGCAACTTTGGATGCTGGTATTAGGCACAGGAATAAGGCCCTTGCTTCCATAGGGGGTCACTTAGCAAAATGGATAAATATGGTAAGAAGAGAGAAGGCTGTGTATGATACGCTCAACATGCTTAATTTTGACGTCACAAAAAAATGCCTAGTTGGAGAGGGATGGTGCCCCATATTTGCTAAAACACAGATCCAGGAGGCACTGCATCGTGCAACTTTTGATAGTAATTCTCAAGTTGGCATAATCTTTCATCCGATGGATGCAGTGGAATTGCCGCCTACTTATTTTAGAACCAACCGCTTTACCAGTGCTTTCCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAGGAAGCAAACCCTTCAGTTTATACTGTAATTACATTCCCATTTCTTTTTGCTGTGATGTTTGGGGACTGGGGTCATGGAATCTGCCTGTTGATAGGAGCATTATTTCTGATAGCACGTGAAAGCAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGAGGGCGCTATGTGCTTCTTTTGATGGCACTGTTTTCAATCTACTGTGGGCTAGTCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTAGATCTGCTTATGATTGCCGAGATACTTCGTGCAGGGATGCACATACTGCTGGCTTAGTCAAATACCATGGTACATACCCATTTGGTGTGGATCCCAGCTGGCGAGGAAGTCGATCAGAATTGGCTTTTCTGAACTCACTCAAGATGAAGATGTCCATTCTTTTGGGAGTGGCACAGATGAACGTAGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGTAACTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTGTTTGGGTATCTTTCCCTTCTCATTATCGTTAAGTGGTGTACTGGGTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTTTAAGTCCCACTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCTTCTTCAGATTGTGTTATTGCTGTTGGCTGTAGTTGCAGTTCCTTGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCAGACAGAGAGATATCAAGGACATGCTTATGATAGGCTAAATACATCTGAGATGGATCTTGAGGCGGAACCAGATTCTGCTAGGGCTAGGCAGCACCCCGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAGTTTGTTCTTGGTGCAGTTTCAAACACAGCATCATACCTTAGACTCTGGGCATTAAGCTTGGCTCACTCAGAACTTTCCACTGTTTTCTATGAAAAAGTCCTCCTTCTTGCTTGGGGGTATGACAATCTGGTTATTCGGTTAGTGGGCTTAGCTGTTTTCTCCTTTGCAACTGCCTTTATACTACTCATGATGGAGACGCTGAGTGCTTTCCTACATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGGGATGGCTATAAGTTCAGACCCTTTTCCTTTGCCTCATTAGCAGAGGATGATGATTGA 2466 0.4242 MDYIDNLPPMDLMRSEKMTFVQLIMPVESAHRAISYLGELGLLQFRDLNDDKSPFQRTFANQVKRCAEMSRKLRFFKDQLNKAGLMCSPSLTLQPDIELEELEIQLAEHEHELNEMNSNSEKLQQSYNELLEFKIVLQKACGFLASSHSHAAIEERELEEHVYSNNDAYVESASLLEQETRPGSSNQSGLRFISGIVCKPKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDIHKHRQITREVSSRLVDLEATLDAGIRHRNKALASIGGHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALHRATFDSNSQVGIIFHPMDAVELPPTYFRTNRFTSAFQEIVDAYGVARYQEANPSVYTVITFPFLFAVMFGDWGHGICLLIGALFLIARESKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLVYNEFFSVPFHIFGRSAYDCRDTSCRDAHTAGLVKYHGTYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNVGIILSYFNARFFGNSVDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRLLQIVLLLLAVVAVPWMLFPKPFILKKLQTERYQGHAYDRLNTSEMDLEAEPDSARARQHPEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLAEDDD 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5395g00036 821 PIRSF ATP6V0A1 8 821 IPR026028 GO:0000220|GO:0046961
Pral5395g00036 821 PANTHER VACUOLAR PROTON ATPASES 12 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral5395g00036 821 Coils Coil 99 126 - -
Pral5395g00036 821 Pfam V-type ATPase 116kDa subunit family 36 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5395g00036 Pral-Chr5395 211680 221056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5395g00036 2 814 Primary Pumps ATPases(2) AT2G28520 80.344 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5395g00036 K02154 - gmx:100793301 1436.78