Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5395g00019 ATGGGTTGTTTTCTCTGCACTCGCGATCCAACCAACAAACCCTCCCCTCACGGCAATTCCAAAAGCCTCGTCCGCTGCGATAAGACGTCCAACCACCACCGCCCTGTTTCAGATAAGGTTCGAGCGGACTCGAACGTGAATGTGAAGAAGGAAGTTATTATTTCTTCCAAGCCTGATGGTTTTTCTCCTGACATAAAGGCCTTAAATTTAGAAGACAAAATTCCAAAGGACGGAAAAGTTGATAATCTGAATCGTGCAAAATCGTTCTCGTTTGATGAGCTCGCAGAGGCGACAGGTCGTTTCAGATCAGATTGCTTGGTGGGGGAAGGAGGTTTTGGGAAAGTTTACAAGGGATGCTTGAAGAAAACGAAGCAGGTGGCGGCCATAAAGCAACTGGACCCGGATGGACATCAAGGGAAGAGGGAATTTGTAGTGGAAGTATTGACACTGAGTATGGCAGACCACCCTAATCTGGTCAAACTCTTAGGGTTCTGTGCCACGGGACAACAAAGGTTGTTGGTCTACGAGTACATGCCTCTGGGATCCCTGGAGAATCATCTCTATGATCTTCCTGCAGGTAGAAAAGCACTAGATTGGAACACGAGAATGAAAATAGTAGCAGGGACAGCAAGGGGTTTGGAATATTTGCATGATAAAATGAAGCCTCCAGTGATATACAGGGACCTGAAATGTTCCAACATATTGCTAGGAGAGGGATATCATCCCAAGTTGTCTGATTTTGGGTTGGCAAAAGTAGGCCCTAGTGGAGAAGACACTCATGTTTTAACTAGGGTTATGGGCACATATGGCTATTGTGCTCCAGAATATGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTTATCACCGGGCAAAAAGCTTTTGACAACTCAAGACCTGCCAAGCAACAGAACCTAGTCTCTTGGGCAAGGCCAATGTTCAAAGACAGGAAAAGATTCTCAGAAATGGTGGATCCATCGCTTGATGGTCAATATCCAGTGAGAGGATTGTACCAAGCTCTGGCAATTGCAGCCATGTGTGTGCAAGAGAAGCCTCATATGAGACCTGTTATTGCTGATGTTGTCACCGCTCTCAACTTCCTCGCTTCCCAGAGATACGATCCACGCCATCAAATTTCACACAAGCCCAGATCCAAGAAGAGCCTTCCTCCGCTCACAAATCCTCATGATCATGCTCTTCTTGATGCTAATTTCTCTGAGTCTGACAGATCTGGGAACGAAGAAATTAATTTTGACTCAGACAGATCTGCTGGCACCCAACAAAACAACTCTGAGACAGATAGATCTGAGAATGAAGGAAATAATTATGAGTCTGACATATCTGGGAACGAAGAAAATTATTAA 1395 0.4495 MGCFLCTRDPTNKPSPHGNSKSLVRCDKTSNHHRPVSDKVRADSNVNVKKEVIISSKPDGFSPDIKALNLEDKIPKDGKVDNLNRAKSFSFDELAEATGRFRSDCLVGEGGFGKVYKGCLKKTKQVAAIKQLDPDGHQGKREFVVEVLTLSMADHPNLVKLLGFCATGQQRLLVYEYMPLGSLENHLYDLPAGRKALDWNTRMKIVAGTARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGEDTHVLTRVMGTYGYCAPEYAMTGQLTFKSDIYSFGVVLLELITGQKAFDNSRPAKQQNLVSWARPMFKDRKRFSEMVDPSLDGQYPVRGLYQALAIAAMCVQEKPHMRPVIADVVTALNFLASQRYDPRHQISHKPRSKKSLPPLTNPHDHALLDANFSESDRSGNEEINFDSDRSAGTQQNNSETDRSENEGNNYESDISGNEENY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5395g00019 464 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Pral5395g00019 464 CDD STKc_IRAK 107 376 - -
Pral5395g00019 464 MobiDBLite consensus disorder prediction 428 464 - -
Pral5395g00019 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Pral5395g00019 464 SMART serkin_6 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5395g00019 464 SUPERFAMILY Protein kinase-like (PK-like) 87 399 IPR011009 -
Pral5395g00019 464 MobiDBLite consensus disorder prediction 1 36 - -
Pral5395g00019 464 FunFam probable serine/threonine-protein kinase RLCKVII 73 177 - -
Pral5395g00019 464 FunFam Serine/threonine-protein kinase PBS1 178 393 - -
Pral5395g00019 464 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5395g00019 464 PANTHER OS07G0668900 PROTEIN 42 387 - -
Pral5395g00019 464 Gene3D Phosphorylase Kinase; domain 1 72 177 - -
Pral5395g00019 464 Pfam Protein kinase domain 106 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5395g00019 464 MobiDBLite consensus disorder prediction 412 427 - -
Pral5395g00019 464 Gene3D Transferase(Phosphotransferase) domain 1 178 396 - -
Pral5395g00019 464 MobiDBLite consensus disorder prediction 386 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5395g00019 Pral-Chr5395 109095 112248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5395g00019 76 380 Glycoside Hydrolase AT3G07070 61.639 1.56e-138 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5395g00019 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5395g00019 - - gmx:100794680 568.155