Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5395g00003 ATGTACCCACACTCTAACCATACATTCTCACGCGCCGCCAAATCCATCGATCATTTGCCGTCGCCAGCCGCAGCCACCACGCCACCACTACCCCATCCTTCAGTTACGTCAATGCATTCCATCTCCACTTCCCAGCAACACCTCATCCCGGACCAGTTCGCCGTCACTGATTTCGACTCGCTGCTCAGCTCGGAGATGAGCCTCAACAATAATAGTTGCAGCAGCGGTTGTAGCAGCTACGGCTCGCCAAGTTCGCTGCCCACCTATAGAACTCAGCGGCCGAGCTGGATGCAGAGGAGCGAGAGCAGCCACTCGCTCCATAAGAATGAATATCGCAACCCTGTTTCTACTCTGCTTGCCGAGTTTCTCGACTCCGACGACGGTCCGGTTCGCAGAGTCTACAGTACTGGTGATTTGCAGAAGGTAAACGGAATGCAACAGAGGAATCATGGGGCAGAGATTGCATTGTCAAGCGAAAGCAGTATGATCATAGAGGGGATGAGCAGAGCATGTCGTTATAGCCCAGAGGAGAAGAAGGTTAGGATTGAGAGATATAGAAGCAAGCGAAATCTGAGAAACTTCAACAAGAAAATCAAGTATGCATGCAGGAAAACATTAGCAGACAGCAGGCCGCGCATCAGAGGAAGATTTGCAAGGAACGAAGAAACTGACAAGAGCCCTCCAGTTCAGTGGAGCCATGAGAATGGTGTTGGAGCTGACGAAGAAGATGAGGAAGAGGATAATTGGGTTAATTTATTTGATAATTTAGTTGCTGCAAATAATCTTGTTCAAGGGCCTCAAGATAGTTCTCCATTTGGTCTCATGTTTTAG 831 0.491 MYPHSNHTFSRAAKSIDHLPSPAAATTPPLPHPSVTSMHSISTSQQHLIPDQFAVTDFDSLLSSEMSLNNNSCSSGCSSYGSPSSLPTYRTQRPSWMQRSESSHSLHKNEYRNPVSTLLAEFLDSDDGPVRRVYSTGDLQKVNGMQQRNHGAEIALSSESSMIIEGMSRACRYSPEEKKVRIERYRSKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNEETDKSPPVQWSHENGVGADEEDEEEDNWVNLFDNLVAANNLVQGPQDSSPFGLMF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5395g00003 276 MobiDBLite consensus disorder prediction 215 244 - -
Pral5395g00003 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 63 241 IPR045281 GO:0009909
Pral5395g00003 276 MobiDBLite consensus disorder prediction 73 102 - -
Pral5395g00003 276 ProSiteProfiles CCT domain profile. 178 220 IPR010402 GO:0005515
Pral5395g00003 276 MobiDBLite consensus disorder prediction 73 107 - -
Pral5395g00003 276 MobiDBLite consensus disorder prediction 19 43 - -
Pral5395g00003 276 Pfam CCT motif 180 220 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5395g00003 Pral-Chr5395 29537 31824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5395g00003 174 225 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 6.48e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5395g00003 CCT 2.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5395g00003 - - aprc:113859774 255.373