Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5395g00001 ATGATGGATCGTAGAAAAGTTGTCTTATTTATCTGTGGCTTTTCAGTTTTGCCGTTGCTATGCTCTTCTGCCAGCTTCGTTCCACAAGACAATTATCTTATTGATTGTGGAGCAGCATCAAATACTTCATTTGATAGCCGCAATTTCGCGGCGGATGCGTTCTACAAGGATCTCCTTTCTACTAAACGCGACGTTCTCGCCACAACCTCTTCAAAATCAGTCGCTTCCACTGCGGATTCACCTCTCTATCAAACAGCAAGAATCTTCAGTGAACCCTCAAAATACACATTCTCGATCGGCCAAAAGGGTAGACATTGGATCCGTCTCTATTTCTATCCATTTGAGTATCAGAACTTCAACATGAGTACTGCAAATTTTGCGGTCACTACCCAAAACAATATCCTTCTCAGTGACTTCTCTGCCCAGAAAAATCCTGTTCTGAAGGAATACTCTGTGAACGTTACTTCAGACACCCTTGTGATCACCTTTACTCCTTCCAGCAATTCCTTTGCATTCGTGAATGCCATCGAAGTTGTTTCAGTACCCGATGAACTCATTGCCGATGACGCTTCTACCATAAATCCAAGTGAAAGTTTCTCTGGGTTGGTAACGCTGGCATTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAACTGTCTCCTCTGCAAATGACACCCTTCAACGGACCTGGGTACCAGACCAAAATTTTCTTCTCACTCCTAACCTTGCTACCGATGTTACAAATACGGGTGCTGTTAAATATGTAAACGGCGGGCCAACAGAGAATATTGCTCCACGTACAGTCTATGGTACTGCCACAGAAATGAACTCGAGCGGTGATCCTCGTAGTAATTTCAACGTGTCCTGGCAGTTTGATGTAGATCCAGGATTTCAGTATCTTGTTCGATTTCACTTTTGTGACATAGTTAGCAAAAGTCTCAACGAACTTTACTTCAAAATCTATGTCAACTCCTACATGGCGGATAAAAATGTGGATCTCAGCACTTTGAATAACAATCTTTTGGGTGCTCCACTTTACAAGGATTTTGTTACGTCCCCTGATGGCAAGGAAATTCGTGTAAGTGTCGGCCCTGCTTCTTTAGACAATGGTAATTACCCGAATGCCATTTTGAATGGGCTGGAGATCATGAAAATGAATAATTCTAAGGGCAGTCTGAGCGTAGGAACGGCTGTGATTGCTACTGGTTCAAGCTCAAAGAAGAAAGTAGCCATTGTAGTGGGTGTGGTAGTGGGGACATTGTGCGCAGTGGCCTTGGTTTTTTTCTTTGTATTGTGCAGAAGAAAACGTTTGGCACAAGGCCTTTCAAAGACATGGGTTCCCTTATCCATTAATGAGGGAACTTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTAGGGTATCGCATCCCATTTGTGGCAGTTCAGGATGCTACAAACAGTTTTGATGAGAGCTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGGGAACTGAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCTCGGTCCCAGCAAGGGTTTGCAGAGTTCCGAACTGAAATTGAAATGTTATCTCAGTTCCGTCATCGCCATTTGGTGTCACTGATAGGGTATTGTGATGAAAGAAATGAAATGATCCTGATATATGAATATATGGAAAAGGGGACTCTCAAGAGTCATCTCTACGGTTCAGGTCTCCCCAGCTTAAGTTGGAAAGAAAGACTGGAGATCTGTATTGGGGCCGCTAGAGGACTACATTACCTTCACACTGGCTATGCCAAAGCAGTTATACATCGAGATGTGAAGTCGGCGAATATCCTGCTTGATGAGAACCTTATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACGGGGCCTGAAATTGATCAGACTCATGTGAGCACAGCTGTAAAAGGAAGTTTTGGATACCTTGATCCTGAGTATTTCCGTAGGCAACAATTAACAGAAAAATCAGATGTTTATTCATTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCCGTGATAGACCCATCACTTCCCAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAGTGGCAGAAAAAAGGGCAATTGGAACAAATCATAGATCCTACGCTCGCAGGGAAGATCAGACCGGATTCTCTTAGGAAGTTTGGAGAAACTGCAGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTAGAGTATGCCCTTCAGCTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAACATGATTGGTGAACTTTCCCCACAGATAAACAATTTCAACCAGGATGCAAGTGTTTCTGCTGTTCAGTTTGAAGCTTCAACCACGGATGACCTGTCTGGTGTTTCAATGAGTAGGGTTTTCTCACAGCTGGTGAAGTCTGAAGGGAGGTGA 2496 0.4383 MMDRRKVVLFICGFSVLPLLCSSASFVPQDNYLIDCGAASNTSFDSRNFAADAFYKDLLSTKRDVLATTSSKSVASTADSPLYQTARIFSEPSKYTFSIGQKGRHWIRLYFYPFEYQNFNMSTANFAVTTQNNILLSDFSAQKNPVLKEYSVNVTSDTLVITFTPSSNSFAFVNAIEVVSVPDELIADDASTINPSESFSGLVTLALETVWRVNMGGPTVSSANDTLQRTWVPDQNFLLTPNLATDVTNTGAVKYVNGGPTENIAPRTVYGTATEMNSSGDPRSNFNVSWQFDVDPGFQYLVRFHFCDIVSKSLNELYFKIYVNSYMADKNVDLSTLNNNLLGAPLYKDFVTSPDGKEIRVSVGPASLDNGNYPNAILNGLEIMKMNNSKGSLSVGTAVIATGSSSKKKVAIVVGVVVGTLCAVALVFFFVLCRRKRLAQGLSKTWVPLSINEGTSHTMGSKYSNGTTLSAASNLGYRIPFVAVQDATNSFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGFAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNQDASVSAVQFEASTTDDLSGVSMSRVFSQLVKSEGR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5395g00001 831 Gene3D - 30 181 - -
Pral5395g00001 831 Gene3D - 205 388 - -
Pral5395g00001 831 PANTHER OS07G0166700 PROTEIN 478 768 IPR045272 GO:0004714|GO:0006468
Pral5395g00001 831 FunFam receptor-like protein kinase FERONIA 455 566 - -
Pral5395g00001 831 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Pral5395g00001 831 Pfam Malectin-like domain 34 386 IPR024788 -
Pral5395g00001 831 Pfam Protein tyrosine and serine/threonine kinase 496 689 IPR001245 GO:0004672|GO:0006468
Pral5395g00001 831 SUPERFAMILY Protein kinase-like (PK-like) 469 762 IPR011009 -
Pral5395g00001 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Pral5395g00001 831 FunFam Putative receptor-like protein kinase 31 182 - -
Pral5395g00001 831 Gene3D Phosphorylase Kinase; domain 1 453 566 - -
Pral5395g00001 831 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5395g00001 831 FunFam Receptor-like protein kinase FERONIA 206 388 - -
Pral5395g00001 831 FunFam Receptor-like protein kinase FERONIA 567 782 - -
Pral5395g00001 831 CDD STKc_IRAK 497 762 - -
Pral5395g00001 831 Gene3D Transferase(Phosphotransferase) domain 1 567 784 - -
Pral5395g00001 831 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5395g00001 Pral-Chr5395 20015 23413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5395g00001 2 831 Receptor kinase-like Gene Family AT3G46290 67.381 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5395g00001 Malectin_like 2.1e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5395g00001 - - gmx:100806488 1327.77