Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5393g00042 ATGTCTTCCCAAAACAAGGGATTTTGGATGGTAATGGGTGACAAAAAGGCAGCATTTGGTCATCCTTCCAAAATTGAACCAAAGCGGTCTCGTCACTGTTTTGTTGATTCTGCTGAAATAGATTCTTTAGCAAACAAGAAGCAAGCTACGGAAGATGCTAATGGAAAATCAAGTTCAGGATTGTCAAATGCGTTTACATCTTGGCAGAGCAATTCTTCTTTTCATTCTGTTCCAATCCAGTTTCTTGGCGGATCTTTTAGATCCGAAACTAGGCCTGTCAATTTCGGTGAAGAGAAAACTTTTTTTATGACTGATGATTTCAATGCACGAACAAAAATGTCATATGGGGAAGATGCCTCTTTTGACCTGTCTATATCTCATTCTGTTGAAGATTCTGATACATGTCTAGGTTTCGGTGGAATTAAAAAAGTGAAAGTCAATGGTGTTAAAGATTGCGACAATGCACAGCCTTCAGGGAGTCGTAATCTTGACATACAGAATGTTGGCAATCTACATCAGGCTTGTAACAGAGAACCTGAGTCAAAATCTATATCAACGGGGCAAGCCTTTGATACGGAGGGTGGTGTCACATTAATGGGACTTACATGCGATAGAGCGGAAGCACATATTAGATCACTAGATGGCCCTTCTTGCAGAGTAGCAGTGAATGCCACATCTATTAGTGATTCCTGTAATAAAGATGACACGAATGTAATTTCTTTTGGTGGCTTCCTAGATGAACAGGATGCCATCCCTGCGAATAGGCCAGCGAGAGAATATGGTCCGTTGTACGATCAATCTTCAGTTGAGGTGTCAGTGGCAGCTGACAAAACAGAGATGGATGTTTCAAATTCAAATGCGATTGTAAATTCTCCTCTGGTGGCTAAACTTAAACCCGAGTCTCTGTCCAAAAAGATACCAGAGTGTAGAATAACAAGGAAAGAAACTCCAAATAGTTTCCCTTCTAACGTCAGAAACTTGATTTCTACTGGTATGCTAGATGGAGTTCCTGTAAAGTACACCTCAGTGGCACGGGAGGAACTCCGTGGAGTTATTAAAGGTTTTGGCTATCTGTGTGGTTGTCAATCATGCGATTATACCAAGGTTTTAAATGCTCATGAGTTTGAGACACATGCTGGTTGCAAAACAAAACACCCTAACAAGCACATTTACTTTGAGAACGGGAAGACCATATATCAAATAGTTCAGGAACTGAAGAATACCCCTGAAAGTTTGTTGGTTGATACAATTCAAACGGTTTTTGGTTCAAAAATTAATCAGAAAGCATTTCACAGTTGGAAAGAATCATTTCAAGCAGCAACTCGTGAGCTTCAGCGCATTTACGGAAAGGAAGTACTAATAAGTCCCTAG 1371 0.4034 MSSQNKGFWMVMGDKKAAFGHPSKIEPKRSRHCFVDSAEIDSLANKKQATEDANGKSSSGLSNAFTSWQSNSSFHSVPIQFLGGSFRSETRPVNFGEEKTFFMTDDFNARTKMSYGEDASFDLSISHSVEDSDTCLGFGGIKKVKVNGVKDCDNAQPSGSRNLDIQNVGNLHQACNREPESKSISTGQAFDTEGGVTLMGLTCDRAEAHIRSLDGPSCRVAVNATSISDSCNKDDTNVISFGGFLDEQDAIPANRPAREYGPLYDQSSVEVSVAADKTEMDVSNSNAIVNSPLVAKLKPESLSKKIPECRITRKETPNSFPSNVRNLISTGMLDGVPVKYTSVAREELRGVIKGFGYLCGCQSCDYTKVLNAHEFETHAGCKTKHPNKHIYFENGKTIYQIVQELKNTPESLLVDTIQTVFGSKINQKAFHSWKESFQAATRELQRIYGKEVLISP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5393g00042 456 Pfam Tify domain binding domain 350 405 IPR032308 -
Pral5393g00042 456 PANTHER AUTOIMMUNE REGULATOR 21 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5393g00042 Pral-Chr5393 209435 212650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5393g00042 299 438 PHD Transcription Factor Family AT3G53680 47.518 1.82e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5393g00042 - - gmx:100802229 562.762