Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5393g00027 ATGGCGAAGACATTAATCTCCTCTCCTTCGTTCATCGGCACCCCTCTTCCTTCTATCTCTCGCCTTGGTCTACACACCTTCCATCTCCCTCATCGTAGGCTGGTCAGCACCCGAGTTAAATTCAGCTTCCACGAAATCCCCCCTATTCACTCCCTCAGTGATTCATTTGACCTCAGTCAAGTCGTTACTAGAGCTGAAGCGCTTCTTTATACCCTTGCTGATGCCGCGGTTTCTGCCGATCCTGGTGCTGGTGCTGCGGCATCGACCTCCACTGATGTTGTCGCGCAGAAGAACGGAGGGTGGTTCGGTTTTATTTCTGAAGCCATGGAGTTTGTTCTCAAGGTGTTAAAAGATGGCCTGAGTGCTGTGCATGTGCCTTACGCATATGGATTTGCTATTATATTGCTCACTTTTATTGTTAAAGTTGCTACATTTCCCTTGACAAAGCAACAGGTTGAATCAACACTTGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATCCAAGAAAGATACGCTGGCAATCAGGAAAGAATACAACTCGAGACATCAAGGCTATACAGGCAAGCGGGTGTCAATCCATTGGCTGGTTGTTTACCGACTTTGGCTACCATTCCTGTCTGGATAGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAAGGGCTTTTGACAGAAGGATTTTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCAGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTCTGCCATTTGTGGATGGTCATCCACCGTTGGGCTGGCAAGACACCGCAGCATATCTTGTTTTACCCATCCTTCTTGTTGTTTCTCAGTATGTTTCTATGGAAATTATGAAACCCCCCCAGACTGATGATCCGGCTCAAAAAAATACACTTCTTGTTTTCAAGTTTCTTCCGCTCATGATTGGTTACTTCTCGCTGTCTGTCCCTTCAGGGCTATCGATTTACTGGTTTACAAACAACGTTTTGAGCACAGCACAACAAGTATGGCTGCGCAAATTAGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCAAGTGGAATTATTACCGCAGGGCGTGCTAAACGATCGGTTTCTCAGCCAGAAAGAACCGGTGAGAGGTTTAAACAGTTGAAGGAAAAAGAGAAAAAGAAGTCAAACAAGGCACTGCCTCAAGAAGAGGCTCAACCTCTGGCTTCTGTTTCTGATTCTGATGGTAGTTCAGATGAGGAGAGTGATGACAAGGGTGACGGAGTTGCGGAAGAAGCATATGCTTCAACAATAAACAAGGAGGTTCCAAATATGAGGGAAAGAAGAAGCAAGCGCTCAAAGCGGAAGCGGACTGTATAA 1359 0.4555 MAKTLISSPSFIGTPLPSISRLGLHTFHLPHRRLVSTRVKFSFHEIPPIHSLSDSFDLSQVVTRAEALLYTLADAAVSADPGAGAAASTSTDVVAQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTFIVKVATFPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLLPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSVSQPERTGERFKQLKEKEKKKSNKALPQEEAQPLASVSDSDGSSDEESDDKGDGVAEEAYASTINKEVPNMRERRSKRSKRKRTV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5393g00027 452 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
Pral5393g00027 452 PANTHER OXA1 73 388 IPR001708 GO:0016020|GO:0032977
Pral5393g00027 452 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
Pral5393g00027 452 NCBIfam membrane protein insertase YidC 129 342 IPR028055 -
Pral5393g00027 452 MobiDBLite consensus disorder prediction 369 393 - -
Pral5393g00027 452 MobiDBLite consensus disorder prediction 362 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5393g00027 Pral-Chr5393 135295 140563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5393g00027 29 396 Chloroplast and Mitochondria Gene Families AT2G28800 71.200 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5393g00027 K03217 - pvy:116146259 681.019