Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5393g00015 ATGTGTCTGGCCTATTCCTTCAAACTCACTCCAAAGAGGTTCTCGTTTATTGCTGACATGGGAGGTTGTCTGGGCTCCCAAATTAAAGCTGAGAGCCAGTGTAACACAGGGCCGAATTCAAAACACGTGAGCACTGATGGAAGTGATCTGAGCAGCACGGGCAGTGAGGTCTCAAAGGCCTCGACAACTCATACTCGCCGGAGTGTGGGTGAGATCTTGCAGTCGCCCGATTTGAAGAGCTTTACTTATGCAGAGCTGAAGGCGGCTACACGAAATTTCCGACCAGATAGTGTTTTAGGAGAAGGTGGTTTTGGATCAGTTTTCAAAGGGTGGATTGATGAGCAGTCCCTTACAGCTGCCAAGCCGGGAACTGGCATTATTATCGCTGTGAAAAGACTTGAGCAAGATAGTATGCAAGGTCACAATGAGTGGCTGGCTGAAGTGAATTTTCTTGGACAATTTTCTCATCCCCATCTTGTAAAGTTGATCGGGTATTGCCTTGAAGACGACCACCGCCTTCTGGTGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTGTTCAGGAGGGGCTCTTATTTCCAACCCCTCTCTTGGAGCCTCCGTTTGAAGGTGGCTCTTGGTGCTGCCAGAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATAGGGACTTCAAGACCTCAAACATCTTGCTTGATTCAAATTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAAGGATGGACCCGGGGGGGACAAAAGTCATGTCTCTACCAGAGTATTAGGAACCTATGGATATGCAGCTCCCGAGTATATAGCCACCGGTCACCTGACTGCAAAGAGTGATGTATATAGTTTTGGGGTGGTACTGGTTGAAATGCTATCAGGTCGGCGAGCAATGGACAAGAGTCGACCATCAGGACAGCGCAACTTGGTGGAGTGGGCTAAGCCATACCTGGCGAACAAACGTAAGCTTTTTCTCGTGCTGGATACTCGTCTCGAGGGTCAGTACACAATAGACGAGGCCTACAAGACAGCGACGTTGGCATTGCGATGCATTTCAATCGAATCCAAGTTCAGGCCAAGCATGGAAGAGGTTGTTTCTACATTGGAGCAGCTTCAAGTTCCCATTGTAAATGGAGGCACACAAGAGCCGTCTGTGAAGAGATCCAGTGGCAGAAAAAGTGAAGGTGACGCTAAGAATGGGAGGACCACCACACCTTACCCCCGCCCATCCGCTTCCCCTCTCTATGCTTGA 1272 0.4858 MCLAYSFKLTPKRFSFIADMGGCLGSQIKAESQCNTGPNSKHVSTDGSDLSSTGSEVSKASTTHTRRSVGEILQSPDLKSFTYAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSLTAAKPGTGIIIAVKRLEQDSMQGHNEWLAEVNFLGQFSHPHLVKLIGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAARGLAFLHSAETKVIYRDFKTSNILLDSNYNPKLSDFGLAKDGPGGDKSHVSTRVLGTYGYAAPEYIATGHLTAKSDVYSFGVVLVEMLSGRRAMDKSRPSGQRNLVEWAKPYLANKRKLFLVLDTRLEGQYTIDEAYKTATLALRCISIESKFRPSMEEVVSTLEQLQVPIVNGGTQEPSVKRSSGRKSEGDAKNGRTTTPYPRPSASPLYA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5393g00015 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Pral5393g00015 423 FunFam Probable serine/threonine-protein kinase PBL8 179 394 - -
Pral5393g00015 423 ProSitePatterns Protein kinases ATP-binding region signature. 99 131 IPR017441 GO:0005524
Pral5393g00015 423 PANTHER OS01G0588500 PROTEIN-RELATED 58 379 - -
Pral5393g00015 423 MobiDBLite consensus disorder prediction 383 423 - -
Pral5393g00015 423 CDD STKc_IRAK 99 378 - -
Pral5393g00015 423 ProSiteProfiles Protein kinase domain profile. 93 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5393g00015 423 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Pral5393g00015 423 SUPERFAMILY Protein kinase-like (PK-like) 67 375 IPR011009 -
Pral5393g00015 423 Pfam Protein tyrosine and serine/threonine kinase 97 375 IPR001245 GO:0004672|GO:0006468
Pral5393g00015 423 FunFam Serine/threonine-protein kinase BIK1 60 178 - -
Pral5393g00015 423 MobiDBLite consensus disorder prediction 34 67 - -
Pral5393g00015 423 Gene3D Transferase(Phosphotransferase) domain 1 179 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5393g00015 Pral-Chr5393 45380 48027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5393g00015 71 375 Glycoside Hydrolase AT3G07070 49.020 2.56e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5393g00015 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5393g00015 - - qsu:111987244 630.172