Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5393g00004 ATGGATCTTCACTTTGACGGAAGTCAAGATTTTATAAACGGTTATAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAACGATTTACCATATCCAGCGAGCGAGTGGGAACTCGACGAAAACTATCGGATACTTCTCAACTTCACAACCGATCCACTGTATCAACCTTATGCGTCTCCAGTAAGTTATGCTCCGCAATCTAGCGTGAAATATGAAGGATCAGAGCGGTTAGTTTCATCCTCGACTACAGGACCAGTAGAAGGCATGTCAGATGTGGCAGCTGCGTCGACGACTTCGTCCCCAGATCCTTCTCTGGAAGACGCTGACTTTTCAGAAACTATGAGGTACATAAGCCAAATGCTTATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCCTTGAGTCTACAAGTCACGGAGAAATCATTCTATGATGCTCTCAGAAAGGATCATCCTCCTTCCCCCAATCAGCATCCCCTAGACATTCATCAGAATCTTGATAGCACAGATGATAACTGTTGTGCTAGTAGTAATGATTTTGTCAATAACAGTAGCAGCAGCAACAAGTCTCGGGAGGCTAATAAGCCCTCTTCCTCCTATGCTTCATTTTCTGGAGATTATGCGTCCCACTTAAATTTTCAACCCATCTCTGAGAAACCATCTCAACCTCCGAGTGCTTATACTTGTATCAGCGACGGGCTGTCAGAGGTGGATTCCTCTTTTACTAAGGTCATGGCTCAAAATATCTTTACTGATGCAGAATCCGTTTCACAATTTAAAAGGGGGTTGGAAGAAGCTAGCAAGTTTCTTCCCAGAGGACTTCAACTTGTCACAGGTCTGGAGAGCAGCAACGTGCTTCCAGAGTCCATGGGAGCGGCTAAAAAGGCAATAAGAGATATTCGGGAGAATTCACATGGAATGAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAACAAGCAGTCGGCAGTGTATGCCGACGAGAGTGATATATCAGATATGTTTGATAAGGTGTTGCTTAGTGTTGAGAATGTTCCGATATGTGAGGAGCACCACAGATGGTTGCAGAATGGAACAGACAAGGCGAAAGAGCCAATTGAGCAGCTAAATTCATCCAACGGGGCGAAGACCCGCGGTAGGAGACAAGGCAGGAAGAAGGAAACCGTGGATTTAAGGACTCTTATGGCTCTATGCGCGCAAGCTGTGTCTGCAAATGACTGCAGAACTGCCAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCCCCACTAGGTGATGCATCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCGGTGGTACTGGAACCAAAATATTCTATGCCTCTCTAAGCTCTAAGAGGATATCTTCTGCTAATATCTTGAGAGCTTACTCGGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTCGCAAATAAGATGATTATGAAAGCAGCTGAAAAGGCAGAAAGTCTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTTTCGCAAAGGGCTGGTGGGCCTCCGAAACTACGCATCACAGGGATAGAATTGCCCCAGGCTGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCCAATTATTGCAAGCGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAGACCATCCCGTTAAAGGACTTTAAGATTGAGAGCAACGAACTGCTTGCTGTGAACTGTTTGATGAGATTTAAAAATTTACTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCTGATATTTTTGTTCAATCCATTGTCAATGGATCCTACAATGCCCCTTTCTTTGCCACACGGTTCAAAGAGGCACTGTTCCATTTTTCTGCAATGTATGATATGTTTGACACCGTCATACCTCGTGACAATGAATGGAGGCTGATGCTTGAGAGTGAGTTTTTGGGTCGGGAGGTTATGAATGTGGTTGCTTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGACATACAAGCACTGGCAAGTTAGGGGTACAAGGGCTGGTTTCAGGCAGTTCCCACTGCCAGATGAGATTATGGTCAAATTCAGCGAAAAGTTGAAGGCATGGTATCACAGGGATTTTGTAATTGATGAACACAACAACTGGATGATTCAGGGCTGGAAGGGCCGCATCATTTATGCTTCCACATGTTGGGGGCCATCATAA 2337 0.4454 MDLHFDGSQDFINGYKLDDGAASSDSNDLPYPASEWELDENYRILLNFTTDPLYQPYASPVSYAPQSSVKYEGSERLVSSSTTGPVEGMSDVAAASTTSSPDPSLEDADFSETMRYISQMLMEENFEQKPSMFYDPLSLQVTEKSFYDALRKDHPPSPNQHPLDIHQNLDSTDDNCCASSNDFVNNSSSSNKSREANKPSSSYASFSGDYASHLNFQPISEKPSQPPSAYTCISDGLSEVDSSFTKVMAQNIFTDAESVSQFKRGLEEASKFLPRGLQLVTGLESSNVLPESMGAAKKAIRDIRENSHGMKGRKNHEREASDTEEGRSNKQSAVYADESDISDMFDKVLLSVENVPICEEHHRWLQNGTDKAKEPIEQLNSSNGAKTRGRRQGRKKETVDLRTLMALCAQAVSANDCRTANELLKQIRQHSSPLGDASQRLAHYFANGLEARLSGGGTGTKIFYASLSSKRISSANILRAYSVLISVCPFRKFAYFFANKMIMKAAEKAESLHIVDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIESNELLAVNCLMRFKNLLDETIEVKSPRDAVLNLIRKMNPDIFVQSIVNGSYNAPFFATRFKEALFHFSAMYDMFDTVIPRDNEWRLMLESEFLGREVMNVVACEGIERVERPETYKHWQVRGTRAGFRQFPLPDEIMVKFSEKLKAWYHRDFVIDEHNNWMIQGWKGRIIYASTCWGPS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5393g00004 778 MobiDBLite consensus disorder prediction 373 387 - -
Pral5393g00004 778 ProSiteProfiles GRAS family profile. 392 776 IPR005202 -
Pral5393g00004 778 Pfam GRAS domain family 402 775 IPR005202 -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 64 108 - -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 303 335 - -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 150 172 - -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 64 106 - -
Pral5393g00004 778 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 321 769 IPR005202 -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 366 396 - -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 183 202 - -
Pral5393g00004 778 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5393g00004 Pral-Chr5393 14401 17425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5393g00004 113 778 GRAS Transcription Factor Family AT1G07530 49.358 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5393g00004 GRAS 5.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5393g00004 - - pcin:129314564 1340.87