Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5393g00003 ATGTACCTCATAGTTTCATCCTCGACTACAGGACCAGTAGAAGGCATGTCAGATGTGGCAGCTGCGTCGACGACTTCGTCCCCAGATCCTTCTCTGGAAGACGCTGACTTTTCAGAAACTATGAGGTACATAAGCCAAATGCTTATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCCTTGAGTCTACAAGTCACGGAGAAATCATTCTATGATGCTCTCAGAAAGGATCATCCTCCTTCCCCCAATCAGCATCCCCTAGACATTCATCAGAATCTTGATAGCACAGATGATAACTGTTGTGCTAGTAGTAATGATTTTGTCAATAACAGTAGCAGCAGCAACAAGTCTCGGGAGGCTAATAAGCCCTCTTCCTCCTATGCTTCATTTTCTGGAGATTATGCGTCCCACTTAAATTTTCAACCCATCTCTGAGAAACCATCTCAACCTCCGAGTGCTTATACTTGTATCAGCGACGGGCTGTCAGAGGTGGATTCCTCTTTTACTAAGGTCATGGCTCAAAATATCTTTACTGATGCAGAATCCGTTTCACAATTTAAAAGGGGGTTGGAAGAAGCTAGCAAGTTTCTTCCCAGAGGACTTCAACTTGTCACAGGTCTGGAGAGCAGCAACGTGCTTCCAGAGTCCATGGGAGCGGCTAAAAAGGCAATAAGAGATATTCGGGAGAATTCACATGGAATGAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAACAAGCAGTCGGCAGTGTATGCCGACGAGAGTGATATATCAGATATGTTTGATAAGGTGTTGCTTAGTGTTGAGAATGTTCCGATATGTGAGGAGCACCACAGATGGTTGCAGAATGGAACAGACAAGGCGAAAGAGCCAATTGAGCAGCTAAATTCATCCAACGGGGCGAAGACCCGCGGTAGGAGACAAGGCAGGAAGAAGGAAACCGTGGATTTAAGGACTCTTATGGCTCTATGCGCGCAAGCTGTGTCTGCAAATGACTGCAGAACTGCCAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCCCCACTAGGTGATGCATCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCGGTGGTACTGGAACCAAAATATTCTATGCCTCTCTAAGCTCTAAGAGGATATCTTCTGCTAATATCTTGAGAGCTTACTCGGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTCGCAAATAAGATGATTATGAAAGCAGCTGAAAAGGCAGAAAGTCTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTTTCGCAAAGGGCTGGTGGGCCTCCGAAACTACGCATCACAGGGATAGAATTGCCCCAGGCTGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCCAATTATTGCAAGCGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAGACCATCCCGTTAAAGGACTTTAAGATTGAGAGCAACGAACTGCTTGCTGTGAACTGTTTGATGAGATTTAAAAATTTACTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCTGATATTTTTGTTCAATCCATTGTCAATGGATCCTACAATGCCCCTTTCTTTGCCACACGGTTCAAAGAGGCACTGTTCCATTTTTCTGCAATGTATGATATGTTTGACACCGTCATACCTCGTGACAATGAATGGAGGCTGATGCTTGAGAGTGAGTTTTTGGGTCGGGAGGTTATGAATGTGGTTGCTTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGACATACAAGCACTGGCAAGTTAGGGGTACAAGGGCTGGTTTCAGGCAGTTCCCACTGCCAGATGAGATTATGGTCAAATTCAGCGAAAAGTTGAAGGCATGGTATCACAGGGATTTTGTAATTGATGAACACAACAACTGGATGATTCAGGGCTGGAAGGGCCGCATCATTTATGCTTCCACATGTTGGGGGCCATCATAA 2118 0.4452 MYLIVSSSTTGPVEGMSDVAAASTTSSPDPSLEDADFSETMRYISQMLMEENFEQKPSMFYDPLSLQVTEKSFYDALRKDHPPSPNQHPLDIHQNLDSTDDNCCASSNDFVNNSSSSNKSREANKPSSSYASFSGDYASHLNFQPISEKPSQPPSAYTCISDGLSEVDSSFTKVMAQNIFTDAESVSQFKRGLEEASKFLPRGLQLVTGLESSNVLPESMGAAKKAIRDIRENSHGMKGRKNHEREASDTEEGRSNKQSAVYADESDISDMFDKVLLSVENVPICEEHHRWLQNGTDKAKEPIEQLNSSNGAKTRGRRQGRKKETVDLRTLMALCAQAVSANDCRTANELLKQIRQHSSPLGDASQRLAHYFANGLEARLSGGGTGTKIFYASLSSKRISSANILRAYSVLISVCPFRKFAYFFANKMIMKAAEKAESLHIVDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIESNELLAVNCLMRFKNLLDETIEVKSPRDAVLNLIRKMNPDIFVQSIVNGSYNAPFFATRFKEALFHFSAMYDMFDTVIPRDNEWRLMLESEFLGREVMNVVACEGIERVERPETYKHWQVRGTRAGFRQFPLPDEIMVKFSEKLKAWYHRDFVIDEHNNWMIQGWKGRIIYASTCWGPS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5393g00003 705 MobiDBLite consensus disorder prediction 77 98 - -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 230 262 - -
Pral5393g00003 705 Pfam GRAS domain family 329 702 IPR005202 -
Pral5393g00003 705 ProSiteProfiles GRAS family profile. 319 703 IPR005202 -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 1 33 - -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 300 314 - -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 230 253 - -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 1 34 - -
Pral5393g00003 705 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 250 696 IPR005202 -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 293 323 - -
Pral5393g00003 705 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5393g00003 Pral-Chr5393 14401 40741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5393g00003 40 705 GRAS Transcription Factor Family AT1G07530 49.358 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5393g00003 GRAS 4.3e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5393g00003 - - pcin:129314564 1232.24