Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5393g00002 ATGGATACTCTTCTGGAGAACTTTCCTGGTAACCTGAATGGATTTAGATTCGACAATGGTCATATTTCAGAACTTCCAAACCAGAACCCTATAAACGGGTTCACCCATGATGATAAATCGGACGTTTCGTCCTTTCCAACCAATTCAGAGTTTCATAGTGAGTCGGGCCAATCTTCTAGCACGAGCACGAATGAAGAATCGGCGGACAGTAACAAATACTCCAATCCGGCTCTCAGATTCATAAGTGAAATCCTCTTGGATGAAGAAGATGACCTGGAGCGCAAGCCTTGCATGTTGCAAGATTGCTTAGCACTCCGGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCGTAGTTACCCCTCTTCTCCTCGTCAACTCTCTGATTGCTTCCATGGTGAAAACACTGATAGCCCGGATGATCAAAACTTCCTTCCTACCCATAGTTTCGAGAGCAGCAGCAGCTATACCACTGATAATACATCTGACTCCGAATGGGTGAACGGTGTTGTCAATTCCCCAGAAAACATCCTCGATATTTCAGATCTGCCTCCCGATCTATTTGGAGTCACCCTTGATCGGAGCAATCTGCAGCTGAATCTTGGGGGTTCCATGCGCAACTCAGGATCCAGAGGAAGAAGGGAAAAGAGAACCCATCGGATGAGCGATTCTATAAACGAAGGGAGCAGAGGCAGCAAAGTTTCTGCTGTCAGTTCAAATGATTCAGAGCCAACGGAAATGTTTGATGAAGTGCTTCTCTGTAATCTCAGAACTAGTCAATCCGAGTTATGTGGCCCACAACCATCTCAAAATGGTGCACTCCATCTAAATGTTGACTCTGGAGGATCAAGCGGGAAGGCAACGCGTTCAAAGAAAGGGTCTAACAAGGGGTCAGCAGTAGATTTGTGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAATGAACTTCTCAAGCAGATCAGGCAGCATTGTTCCCCTTTTGGCGATGGGCTCGAACGGTTGGCTCATTACTTTGCCAATGGTCTTGAGACCCGTTTGGCTGCTGGGACACCATCATATAACCCCCTCAATGGCAACGAAGCAACTGCTGCTGAGATGTTAAAAGCTTACAAACTATACATCACAGCGTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCCAACAGAACAATTCTGCAGCTGGTAGAGGGTGAAAATAACCTTCACATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCCTTATCCAGCGTCTTTCAGAAAGACAAGGTAGTCCTCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGGTTTCGGCCTGCAGAGAGGATTGAGGAGACAGGACGAAGGTTAGCAAACTACTGCAGGAGGTTCAACGTCCCTTTCGAATACAACTGCTTGGCACAGAATTGGGAAACCATCCGACTGGAGGATCTGAAGATCGACAGAACCGAAATAACTGTGGTTAACTGTTTATACAGATTGAAGAACCTGCCTGATGAAACTGTGTCTGTGAACAGTCCAAGGGATGCTGTCTTGAAGCTGATAAGGAAGATCAATCCAAATATTTTCATACATGGCGTTGTCAATGGCACCTTCAATGCCCCATTTTTTGTCACTCGGTTCAGGGAGGCATTGTTCCACTTCTCATCTTTGTTTGACATGTTTGAAGCCAATGTGCCCCGGGAAGATGCAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCCATGAATGTTATAGCGTGCGAGGGGACAGAAAGGGTTGAGAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAATCGTAGAGCTGGATTCAAGCAACTCCGCATTAACGCGCAACTCGTTAGTAAAGCTCAAGAAATGGTGAGGACCGAATATCACAAGGACTTTGCGCTGGATAAGGATAGCAGGTGGGTTTTGCAGGGATGGAAAGGGCGTATCATTCATGCTCTTCTATCTGGAAACCTGCTTAGACAATCACGAGAGAGCATCGTAGTGCGCTCTTGA 2058 0.4655 MDTLLENFPGNLNGFRFDNGHISELPNQNPINGFTHDDKSDVSSFPTNSEFHSESGQSSSTSTNEESADSNKYSNPALRFISEILLDEEDDLERKPCMLQDCLALRAAEKSFYDALGRSYPSSPRQLSDCFHGENTDSPDDQNFLPTHSFESSSSYTTDNTSDSEWVNGVVNSPENILDISDLPPDLFGVTLDRSNLQLNLGGSMRNSGSRGRREKRTHRMSDSINEGSRGSKVSAVSSNDSEPTEMFDEVLLCNLRTSQSELCGPQPSQNGALHLNVDSGGSSGKATRSKKGSNKGSAVDLWTLLTQCAQAVASFDQRNANELLKQIRQHCSPFGDGLERLAHYFANGLETRLAAGTPSYNPLNGNEATAAEMLKAYKLYITASPFLRISNFLANRTILQLVEGENNLHIIDFGICYGFQWPCLIQRLSERQGSPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYNCLAQNWETIRLEDLKIDRTEITVVNCLYRLKNLPDETVSVNSPRDAVLKLIRKINPNIFIHGVVNGTFNAPFFVTRFREALFHFSSLFDMFEANVPREDAERLWFEKGIFGRDAMNVIACEGTERVERPETYKQWQVRNRRAGFKQLRINAQLVSKAQEMVRTEYHKDFALDKDSRWVLQGWKGRIIHALLSGNLLRQSRESIVVRS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5393g00002 685 MobiDBLite consensus disorder prediction 264 295 - -
Pral5393g00002 685 ProSiteProfiles GRAS family profile. 293 672 IPR005202 -
Pral5393g00002 685 MobiDBLite consensus disorder prediction 126 163 - -
Pral5393g00002 685 Pfam GRAS domain family 304 665 IPR005202 -
Pral5393g00002 685 MobiDBLite consensus disorder prediction 227 242 - -
Pral5393g00002 685 MobiDBLite consensus disorder prediction 26 73 - -
Pral5393g00002 685 MobiDBLite consensus disorder prediction 201 242 - -
Pral5393g00002 685 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 229 661 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5393g00002 Pral-Chr5393 7395 9984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5393g00002 1 667 GRAS Transcription Factor Family AT2G29060 43.407 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5393g00002 GRAS 1.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5393g00002 - - gmx:100815586 822.772