Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5392g00012 ATGGATCTTCACTTTGACGGAAGTCAAGATTTTATAAACGGTTATAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAACGATTTACCATATCCAGCGAGCGAGTGGGAACTCGACGAAAACTATCGGATACTTCTCAACTTCACAACCGATCCACTGTATCAACCTTATGCGTCTCCAGTAAGTTATGCTCCGCAATCTAGCGTGAAATATGAAGGATCAGAGCGGTTAGTTTCATCCTCGACTACAGGACCAGTAGAAGGCATGTCAGATGTGGCAGCTGCGTCGACGACTTCGTCCCCAGATCCTTCTCTGGAAGACGCTGACTTTTCAGAAACTATGAGGTACATAAGCCAAATGCTTATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCCTTGAGTCTACAAGTCACGGAGAAATCATTCTATGATGCTCTCAGAAAGGATCATCCTCCTTCCCCCAATCAGCATCCCCTAGACATTCATCAGAATCTTGATAGCACAGATGATAACTGTTGTGCTAGTAGTAATGATTTTGTCAATAACAGTAGCAGCAGCAACAAGTCTCGGGAGGCTAATAAGCCCTCTTCCTCCTATGCTTCATTTTCTGGAGATTATGCGTCCCACTTAAATTTTCAACCCATCTCTGAGAAACCATCTCAACCTCCGAGTGCTTATACTTGTATCAGCGACGGGCTGTCAGAGGTGGATTCCTCTTTTACTAAGGTCATGGCTCAAAATATCTTTACTGATGCAGAATCCGTTTCACAATTTAAAAGGGGGTTGGAAGAAGCTAGCAAGTTTCTTCCCAGAGGACTTCAACTTGTCACAGGTCTGGAGAGCAGCAACGTGCTTCCAGAGTCCATGGGAGCGGCTAAAAAGGCAATAAGAGATATTCGGGAGAATTCACATGGAATGAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAACAAGCAGTCGGCAGTGTATGCCGACGAGAGTGATATATCAGATATGTTTGATAAGGTGTTGCTTAGTGTTGAGAATGTTCCGATATGTGAGGAGCACCACAGATGGTTGCAGAATGGAACAGACAAGGCGAAAGAGCCAATTGAGCAGCTAAATTCATCCAACGGGGCGAAGACCCGCGGTAGGAGACAAGGCAGGAAGAAGGAAACCGTGGATTTAAGGACTCTTATGGCTCTATGCGCGCAAGCTGTGTCTGCAAATGACTGCAGAACTGCCAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCCCCACTAGGTGATGCATCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCGGTGGTACTGGAACCAAAATATTCTATGCCTCTCTAAGCTCTAAGAGGATATCTTCTGCTAATATCTTGAGAGCTTACTCGGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTCGCAAATAAGATGATTATGAAAGCAGCTGAAAAGGCAGAAAGTCTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTTTCGCAAAGGGCTGGTGGGCCTCCGAAACTACGCATCACAGGGATAGAATTGCCCCAGGCTGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCCAATTATTGCAAGCGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAGACCATCCCGTTAAAGGACTTTAAGATTGAGAGCAACGAACTGCTTGCTGTGAACTGTTTGATGAGATTTAAAAATTTACTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCTGATATTTTTGTTCAATCCATTGTCAATGGATCCTACAATGCCCCTTTCTTTGCCACACGGTTCAAAGAGGCACTGTTCCATTTTTCTGCAATGTATGATATGTTTGACACCGTCATACCTCGTGACAATGAATGGAGGCTGATGCTTGAGAGTGAGTTTTTGGGTCGGGAGGTTATGAATGTGGTTGCTTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGACATACAAGCACTGGCAAGTTAGGGGTACAAGGGCTGGTTTCAGGCAGTTCCCACTGCCAGATGAGATTATGGTCAAATTCAGCGAAAAGTTGAAGGCATGGTATCACAGGGATTTTGTAATTGATGAACACAACAACTGGATGATTCAGGGCTGGAAGGGCCGCATCATTTATGCTTCCACATGTTGGGGGCCATCATTATTAAAAGTCAAACTTGTTGGTCCGGTTCTGGTTCAACTGGCATCTATGGATACTCTTCTGGAGAACTTTCCTGGTAACCTGAATGGATTTAGATTCGACAATGGTCATATTTCAGAACTTCCAAACCAGAACCCTATAAACGGGTTCACCCATGATGATAAATCGGACGTTTCGTCCTTTCCAACCAATTCAGAGTTTCATAGTGAGTCGGGCCAATCTTCTAGCACGAGCACGAATGAAGAATCGGCGGACAGTAACAAATACTCCAATCCGGCTCTCAGATTCATAAGTGAAATCCTCTTGGATGAAGAAGATGACCTGGAGCGCAAGCCTTGCATGTTGCAAGATTGCTTAGCACTCCGGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCGTAGTTACCCCTCTTCTCCTCGTCAACTCTCTGATTGCTTCCATGGTGAAAACACTGATAGCCCGGATGATCAAAACTTCCTTCCTACCCATAGTTTCGAGAGCAGCAGCAGCTATACCACTGATAATACATCTGACTCCGAATGGGTGAACGGTGTTGTCAATTCCCCAGAAAACATCCTCGATATTTCAGATCTGCCTCCCGATCTATTTGGAGTCACCCTTGATCGGAGCAATCTGCAGCTGAATCTTGGGGGTTCCATGCGCAACTCAGGATCCAGAGGAAGAAGGGAAAAGAGAACCCATCGGATGAGCGATTCTATAAACGAAGGGAGCAGAGGCAGCAAAGTTTCTGCTGTCAGTTCAAATGATTCAGAGCCAACGGAAATGTTTGATGAAGTGCTTCTCTGTAATCTCAGAACTAGTCAATCCGAGTTATGTGGCCCACAACCATCTCAAAATGGTGCACTCCATCTAAATGTTGACTCTGGAGGATCAAGCGGGAAGGCAACGCGTTCAAAGAAAGGGTCTAACAAGGGGTCAGCAGTAGATTTGTGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAATGAACTTCTCAAGCAGATCAGGCAGCATTGTTCCCCTTTTGGCGATGGGCTCGAACGGTTGGCTCATTACTTTGCCAATGGTCTTGAGACCCGTTTGGCTGCTGGGACACCATCATATAACCCCCTCAATGGCAACGAAGCAACTGCTGCTGAGATGTTAAAAGCTTACAAACTATACATCACAGCGTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCCAACAGAACAATTCTGCAGCTGGTAGAGGGTGAAAATAACCTTCACATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCCTTATCCAGCGTCTTTCAGAAAGACAAGGTAGTCCTCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGGTTTCGGCCTGCAGAGAGGATTGAGGAGACAGGACGAAGGTTAGCAAACTACTGCAGGAGGTTCAACGTCCCTTTCGAATACAACTGCTTGGCACAGAATTGGGAAACCATCCGACTGGAGGATCTGAAGATCGACAGAACCGAAATAACTGTGGTTAACTGTTTATACAGATTGAAGAACCTGCCTGATGAAACTGTGTCTGTGAACAGTCCAAGGGATGCTGTCTTGAAGCTGATAAGGAAGATCAATCCAAATATTTTCATACATGGCGTTGTCAATGGCACCTTCAATGCCCCATTTTTTGTCACTCGGTTCAGGGAGGCATTGTTCCACTTCTCATCTTTGTTTGACATGTTTGAAGCCAATGTGCCCCGGGAAGATGCAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCCATGAATGTTATAGCGTGCGAGGGGACAGAAAGGGTTGAGAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAATCGTAGAGCTGGATTCAAGCAACTCCGCATTAACGCGCAACTCGTTAGTAAAGCTCAAGAAATGGTGAGGACCGAATATCACAAGGACTTTGCGCTGGATAAGGATAGCAGGTGGGTTTTGCAGGGATGGAAAGGGCGTATCATTCATGCTCTTTCTATCTGGAAACCTGCTTAG 4407 0.4541 MDLHFDGSQDFINGYKLDDGAASSDSNDLPYPASEWELDENYRILLNFTTDPLYQPYASPVSYAPQSSVKYEGSERLVSSSTTGPVEGMSDVAAASTTSSPDPSLEDADFSETMRYISQMLMEENFEQKPSMFYDPLSLQVTEKSFYDALRKDHPPSPNQHPLDIHQNLDSTDDNCCASSNDFVNNSSSSNKSREANKPSSSYASFSGDYASHLNFQPISEKPSQPPSAYTCISDGLSEVDSSFTKVMAQNIFTDAESVSQFKRGLEEASKFLPRGLQLVTGLESSNVLPESMGAAKKAIRDIRENSHGMKGRKNHEREASDTEEGRSNKQSAVYADESDISDMFDKVLLSVENVPICEEHHRWLQNGTDKAKEPIEQLNSSNGAKTRGRRQGRKKETVDLRTLMALCAQAVSANDCRTANELLKQIRQHSSPLGDASQRLAHYFANGLEARLSGGGTGTKIFYASLSSKRISSANILRAYSVLISVCPFRKFAYFFANKMIMKAAEKAESLHIVDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIESNELLAVNCLMRFKNLLDETIEVKSPRDAVLNLIRKMNPDIFVQSIVNGSYNAPFFATRFKEALFHFSAMYDMFDTVIPRDNEWRLMLESEFLGREVMNVVACEGIERVERPETYKHWQVRGTRAGFRQFPLPDEIMVKFSEKLKAWYHRDFVIDEHNNWMIQGWKGRIIYASTCWGPSLLKVKLVGPVLVQLASMDTLLENFPGNLNGFRFDNGHISELPNQNPINGFTHDDKSDVSSFPTNSEFHSESGQSSSTSTNEESADSNKYSNPALRFISEILLDEEDDLERKPCMLQDCLALRAAEKSFYDALGRSYPSSPRQLSDCFHGENTDSPDDQNFLPTHSFESSSSYTTDNTSDSEWVNGVVNSPENILDISDLPPDLFGVTLDRSNLQLNLGGSMRNSGSRGRREKRTHRMSDSINEGSRGSKVSAVSSNDSEPTEMFDEVLLCNLRTSQSELCGPQPSQNGALHLNVDSGGSSGKATRSKKGSNKGSAVDLWTLLTQCAQAVASFDQRNANELLKQIRQHCSPFGDGLERLAHYFANGLETRLAAGTPSYNPLNGNEATAAEMLKAYKLYITASPFLRISNFLANRTILQLVEGENNLHIIDFGICYGFQWPCLIQRLSERQGSPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYNCLAQNWETIRLEDLKIDRTEITVVNCLYRLKNLPDETVSVNSPRDAVLKLIRKINPNIFIHGVVNGTFNAPFFVTRFREALFHFSSLFDMFEANVPREDAERLWFEKGIFGRDAMNVIACEGTERVERPETYKQWQVRNRRAGFKQLRINAQLVSKAQEMVRTEYHKDFALDKDSRWVLQGWKGRIIHALSIWKPA 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 920 957 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 821 866 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 150 172 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 64 106 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 366 396 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 303 326 - -
Pral5392g00012 1468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1033 1456 IPR005202 -
Pral5392g00012 1468 ProSiteProfiles GRAS family profile. 1087 1466 IPR005202 -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 373 387 - -
Pral5392g00012 1468 ProSiteProfiles GRAS family profile. 392 776 IPR005202 -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 64 108 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 303 335 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 1021 1036 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 183 202 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 995 1036 - -
Pral5392g00012 1468 MobiDBLite consensus disorder prediction 1058 1089 - -
Pral5392g00012 1468 Pfam GRAS domain family 402 775 IPR005202 -
Pral5392g00012 1468 Pfam GRAS domain family 1098 1466 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5392g00012 Pral-Chr5392 67011 77076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5392g00012 871 915 GRAS Transcription Factor Family AT1G07530 57.778 1.74e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5392g00012 GRAS 2.1e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5392g00012 - - aprc:113855970 1605.88