Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5392g00009 ATGCACCTCTTCCTCCTCCTCTTCCTTTCCTTCTTCCTTCTTCGACTCCTCTTCGTCCAATGGCGTCGCTCCCGCCACAAACGCTTGCCCCCCGGTTCCGTTGGTTGGCCCTATATAGGCGAGACCCTCAAGCTCTACACGGAGAACCCGAACTACTTCTTCTCCAACCGTCAAAAACGGTACGGTGACATATTCAAGACACATATATTGGGATGTCCATGCGTGATGATATCAAGCCCCGAGGCGGCCAGGACTGTGCTCGTCACTCATGCGCACCTGTTTAAGCCCACCTTCCCCCCAAGCAAAGAGAAATTGATCGGCCCCGAGGCCGTCTTCTTTCAGCAGGGTGCTTACCACTCCATGCTCAAGAAGCTGGTTCAGGCCTCTTTTTTACCCTCTGCTCTTAAGAACTCTGTCTCTGAGATTGAGCACATCGTTCTCAGATTGCTCCCCTCTTGGAACCACGCCACCATCAACACCCTCCAAGAAATGAAAAGGTATGCTTTCGAGGTGGCGGTTATCTCGGCCTTCGGCGAAACCAAGGAAGTCGAGATGGCAGAAATCAAAGACTTGTATCGGTGCTTGGAGAAAGGCTACAATTCCTTGCCTTGGGATCTTCCTGGAACTTCCTACAGAAAGGCAATGAAGGCGAGGAAGCTTCTGAATGAGACCATAAGGACGCTGATACGTAGGAGAACGGAAAGTGAGAAGCATGAACGAGGGTTATTGGGAATTCTATTGCGAGCGAGGAATCAAAAGATGTATCAACTCACTGATTCTCAGATAGCTGATAATCTCATAGGCGTCATATTTGCTGCCCACGATACCACTGCTAGTGCCATAACATGGGTTCTCAAGTATCTGCACGATAATGTCCATCTTCTAGAATCCGTGACGAAAGAACAGGAAGAGATTAGAAGCAAACTTGTTGAGGAAAATCGGGGCCTTACGTGGGATGATACCAGGCGCATGCCATTCACCAGCCGGGTAATTCAAGAAACGCTGAGAAGTGCAAGCATACTGTCATTCACATTCAGAGAAGCGGTGAGAGATGTTGAGCTGGAAGGGTATTCAATTCCTAAGGGTTGGAAGGTGCTTCCCCTCTTCAGAAGCATTCATCACTCTGCTGATTTCTTCCCTCAACCCGACAAATTCGACCCTTCCAGATTTGAGGTGCCACCGAGACCAAACACGTACATGCCATTCGGGAAAGGAGTCCACTCTTGTCCAGGCAGTGACCTGGCTAAGCTCGAGATTCTCGTCCTCCTCCACCACCTCGCCATTTCTTACAGGTGGCAAGTCGTGGGAAATGAAGATGGTATTCAGTATGGTCCTTTTCCTGTGCCTAAACATGGATTACCAGTAAGGATAACCCCGAGGAACAAGACAGTTACCTGA 1398 0.495 MHLFLLLFLSFFLLRLLFVQWRRSRHKRLPPGSVGWPYIGETLKLYTENPNYFFSNRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTHAHLFKPTFPPSKEKLIGPEAVFFQQGAYHSMLKKLVQASFLPSALKNSVSEIEHIVLRLLPSWNHATINTLQEMKRYAFEVAVISAFGETKEVEMAEIKDLYRCLEKGYNSLPWDLPGTSYRKAMKARKLLNETIRTLIRRRTESEKHERGLLGILLRARNQKMYQLTDSQIADNLIGVIFAAHDTTASAITWVLKYLHDNVHLLESVTKEQEEIRSKLVEENRGLTWDDTRRMPFTSRVIQETLRSASILSFTFREAVRDVELEGYSIPKGWKVLPLFRSIHHSADFFPQPDKFDPSRFEVPPRPNTYMPFGKGVHSCPGSDLAKLEILVLLHHLAISYRWQVVGNEDGIQYGPFPVPKHGLPVRITPRNKTVT 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5392g00009 465 CDD CYP90-like 57 459 - -
Pral5392g00009 465 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 Pfam Cytochrome P450 30 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Pral5392g00009 465 Gene3D Cytochrome P450 19 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 SUPERFAMILY Cytochrome P450 22 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PANTHER CYTOCHROME P450 26 26 449 - -
Pral5392g00009 465 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5392g00009 465 FunFam Abscisic acid 8 19 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5392g00009 Pral-Chr5392 57289 61145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5392g00009 6 455 Cytochrome P450 AT3G19270 56.763 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5392g00009 K09843 - gmx:100782541 761.525