Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5391g00019 ATGACCAGTTTGTTGAAGCAAATGGAGCATGAAAAAACTCCTGTCCTAGAAGCGAGTTCCATGCGGGAAATAGAGATGACAGTTGACTCCGAAAGAATTGATATTCTTCCTGTGGCAACAGAATCATCTTGCATTTCTGGTTGCCCTTTTTCCAGACAAGAACATAGTCTTGTGGCATCAGAAGAGTCATCAAAGTCGGCAAAGAAACTTTGTGGACTCATAGTATTCTATGCAATGGTTATGCTTGTGGAAATTGTTGGTGGTTTGAAAGCCAACAGCCTAGCTGTTATCAGTGATGCTGCGCACTTGCTTTCGGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCCTCAGGTTGGGAGGCAACTCCACATCAGTCTTTTGGATACAATCGACTTGAAGTTTTGGGTGCTCTCTTATCTGTGCAGTTGATCTGGCTAATATCTGGCTTTTTAATATATGAAGCACTTGGGAGACTTCTTTACAGAAAGGCCAGGGTGAATGGCATGCTCATGCTTTCAATTGCAGCATTTGGATTCGTTCTTAACTTAATCATGGTTTTATGGCTTGGTCATGATCACAGTCATCACCACCATCATCATGGCTGCGGAGACTCTAATCATGATCATGGAAAGGAGGAGCAACATAATAACATAACAGATGAAGAGGAGCTTAGTCTAGTTTCAAGTAGTCCTAGAAAAGGAAATGTCCTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAATCTGTCGGGGTGATGATTGCTGGAGCTGTGATATGGGCTAAACCAGATTGGTTAGTCGTTGACCTGCTGTGTACTCTAATATTCTGTGTCATATCTCTGGGAACTACAGTGTCAACGCTCAATAATATTTACGGCATTCTGATGGAGAGGACGCCAAGTGACATCGATATCATGAAGCTGGAAAATGACCTCAAGGGCATCAAGGGAGTGCAAGATATTCACGACTTGCACATTTGGGCCATAACTGTTGGGAAAAATGTTCTTTCTTGTCATGTAGTAGCCGAGCCTGGGATCAGCTTCCCTGATTTGCTCAATAGGATTAGGCATTATTGTGAAAAAACACACAAGATTCATCATGTAACCATACAAATTGAGTAA 1149 0.4238 MTSLLKQMEHEKTPVLEASSMREIEMTVDSERIDILPVATESSCISGCPFSRQEHSLVASEESSKSAKKLCGLIVFYAMVMLVEIVGGLKANSLAVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALLSVQLIWLISGFLIYEALGRLLYRKARVNGMLMLSIAAFGFVLNLIMVLWLGHDHSHHHHHHGCGDSNHDHGKEEQHNNITDEEELSLVSSSPRKGNVLNINLQGAYLHVMADLIQSVGVMIAGAVIWAKPDWLVVDLLCTLIFCVISLGTTVSTLNNIYGILMERTPSDIDIMKLENDLKGIKGVQDIHDLHIWAITVGKNVLSCHVVAEPGISFPDLLNRIRHYCEKTHKIHHVTIQIE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5391g00019 382 MobiDBLite consensus disorder prediction 202 227 - -
Pral5391g00019 382 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 306 IPR027469 -
Pral5391g00019 382 Pfam Cation efflux family 74 304 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral5391g00019 382 MobiDBLite consensus disorder prediction 202 223 - -
Pral5391g00019 382 NCBIfam cation diffusion facilitator family transporter 68 382 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral5391g00019 382 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 309 382 IPR036837 -
Pral5391g00019 382 Gene3D Cation efflux protein transmembrane domain 66 304 IPR027469 -
Pral5391g00019 382 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 43 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5391g00019 Pral-Chr5391 60357 62515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5391g00019 8 382 Inorganic Solute Cotransporters AT2G29410 50.653 1.92e-121 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5391g00019 K14689 - gmx:100777590 532.332